Ursus arctos horribilis (North American brown bear): 113268095
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Entry
113268095 CDS
T05909
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
uah
Ursus arctos horribilis (North American brown bear)
Pathway
uah04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113268095 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uah03000
]
113268095 (SOX17)
Transcription factors [BR:
uah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113268095 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
113268095
NCBI-ProteinID:
XP_026372254
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSSPDAGYASDDQSQTRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAATLGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYPQASDYAGPPEPPVGPMHSRLGLEQACPAMPGHVAPSSALQLYYNAI
SSPAAGGGRGFSMQPQQHQPGPGQPSPPPEALPCRDGADPNQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgatcaaagccagacccgcagcgcgctg
cccgcggtgatggccgggctgggcccctgcccctgggccgagtcgctgagccccctcggg
gacatgaaggtgaagggcgaggcggcggcgagcagcggggcgccggctggggcggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggctaag
gacgaacgcaagcgcctggcgcaacagaacccggatctgcacaacgccgagttgagcaag
atgctgggcaagtcgtggaaagcgctgaccctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
aggcgcaagcaggtgaagcgactgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccgcaggccgccacgctgggccccgagggcggccgcgtggccatggacggcctaggc
ctgcccttccccgagcagggcttcccggcgggcccgccgctgttgcccccgcacatgggc
ggccactaccgcgactgccagggactgggcgcacccccgctcgacggctacccgctgccc
acgccggacacgtccccgctggacggcgtggagccggatcccgccttcttcgccgcgccg
ctgcccggggactgtcccgcggccgggccctacagctacccgcaggcctcggactacgca
gggcccccggagccgcccgtcggccccatgcactcccggctcggcctggagcaggcgtgc
cctgcaatgccgggccacgtggcgccctccagcgccctccagctgtactacaacgcgatt
agctcgccggcggcgggcggcgggcgcggcttctccatgcagccccagcagcaccagccc
ggcccggggcagccgtcgccccctcccgaggccctgccctgccgggacggggcggaccca
aaccagcccgcggagctcctcggtgaggtggaccgcacggaatttgaacagtatctacac
tttgtgtgcaagcccgagatgggtctcccttaccagggacatgactctagtgtgaatctc
ccagacagccacggggccatttcctcggtggtgtcagatgccagctctgcggtatattac
tgcaactatcctgacgtttga
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