Ursus americanus (American black bear): 123782169
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Entry
123782169 CDS
T07931
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03013
Nucleocytoplasmic transport
uar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123782169 (SRRM1)
03015 mRNA surveillance pathway
123782169 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123782169 (SRRM1)
03041 Spliceosome [BR:
uar03041
]
123782169 (SRRM1)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123782169 (SRRM1)
Spliceosome [BR:
uar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
123782169 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
123782169
NCBI-ProteinID:
XP_045638082
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRYNTIRK
SRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQ
EATSTSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHT
RPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLS
GSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPT
PQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAA
DSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKR
QKETSPRMQMGKRWQSPVTKSGSRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRT
PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP
KQRSSPVTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPRPRAPQTSSSPPPVR
RGASSSPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAA
KKPPAPQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKK
DKKHKKHKKHKKEKAVAAAAAAAVAPTAPTAPTTTSAQEEPEAEPEPKKETESEPEDNLD
DLEKHLREKALRSMRKAQVSPQS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcgaagcccaagaaggtacaacacaatacgcaaa
tccagatctccttcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagt
cattctcgatctccccgtcacagaaccaagagccggagtccttcccctgctccagaaaag
aaggaaaaaactccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaa
gaggccacttctactagtgacatcctgaaagttcccaaacccgaacctgtaccagagcct
aaagaaccttctccggagaaaaattccaaaaaagaaaaggagaaggagaagacccgacca
agatctcggtcacgttccaaatcaagatcccggacacggtctcgctctccttctcatact
cgacctagacggcgtcatagatcccggtcaagatcgtactcacctagaaggaggccaagt
ccgagaaggcggccatctcctcgaagaagaaccccgccaagacgaatgccgcctccaccc
aggcatagaaggagtagatctccagtgagacgaagaaggcgttcatcagcctccttgtct
ggaagtagctcatcatcctcttcgtctcgttcccggtcaccgccaaagaagccgcctaag
aggacatccagcccccctcgaaaaactcgtaggttatctccttcagcaagtcctcccagg
cgaaggcacaggccatcacctccagcaactccaccgccaaaaactcgtcattccccaaca
ccccagcagtcaaaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttca
ggtaaagtgacaaaacataaaggtactgagaaaagagagtccccttcaccagcacctaag
cctagaaaagtagagttatctgaatcggaagaagataaaggtggcaaaatggctgcggca
gattctgtgcagcagagacgtcagtacagacgacagaaccagcagtcctcatctgattct
ggctcctcttcttcctcagaagatgagcgacccaagaggtcccacgtgaagaatggtgag
gtaggcaggcggcggagacattccccttcccggagtgcctctccatcacctcgaaagcgc
cagaaagagacttcccctcggatgcaaatgggaaagcgatggcaatcgccagtgactaaa
agtggtagtagacggaggaggagtccctccccaccacccaccagaaggcgacgttctcct
tctcctgcccctcctcctcgtaggcgcaggtctcccacgccgccaccacgacgaaggact
ccttctcctcccccccgccggcgctcaccttccccaagaagatactctccaccgatacag
aggagatactctccttctccgcctccaaagagaagaacggcttctccccctccccctcct
aaacgaagggcgtcaccatctccaccaccaaagcggcgggtctcccattctccacctccc
aaacaaagaagctccccggtcaccaagagacgttcgccttcattatcatcaaagcatagg
aaagggtcttccccgagccggtctacccgggagccccggtcaccacaaccaaacaaaagg
cattcgccctcaccacggcctcgagctcctcaaacctcctcaagtcctccacctgttcga
agaggggcatcatcatcaccccaaagaaggcagtccccttctccaagtactaggcccatt
aggagagtctccaggactccggaacccaaaaagacaaaaaaggctgcctcaccaagccct
cagtctgtaaggagggtctcatcctcccgatctgtctcaggatctcctgagccagcagct
aaaaaacccccagcacctcaatctcctgtccagtcccagtccccctctaccaactggtca
ccagcggtaccggtcaaaaaggctaaaagcccaacaccaagcccatctccagcaaggaac
tcagacccagaaggaggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaag
gataagaagcacaagaagcacaaaaaacacaagaaggaaaaggccgtggcggcagccgcc
gcagcagccgtcgcccccacggcccccacggcccccacgaccacatcagcacaggaggaa
ccggaggcagagcccgagcctaagaaggagaccgaaagcgagcccgaagacaacctcgac
gacttagaaaagcacctgcgcgaaaaggcgctgaggtcgatgcggaaggctcaagtgtcc
ccacagtcttag
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