Ursus americanus (American black bear): 123801322
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Entry
123801322 CDS
T07931
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA helicase A [EC:
5.6.2.6
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uar03041
]
123801322 (DHX9)
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123801322 (DHX9)
Spliceosome [BR:
uar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123801322 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
ResIII
AAA_19
AAA_14
ATPase
AAA_22
T2SSE
Motif
Other DBs
NCBI-GeneID:
123801322
NCBI-ProteinID:
XP_045667250
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MGDVKNFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYIGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGVAPPPPPLTDIPDTAATTGGGLPTTMGGPLPPHLAL
KAENNSGIGASGYGPPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWTLE
NAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAA
QSCALSLVRQLYHLGVIEAYSGLTKKKEGETVEPYKVNLSQDLEHQLQNIIQELNLEIVP
PPDDPFMPVVLNLGKLAHFEPSQRQNQMGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQ
ISMDLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTT
QVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVL
PRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRI
VLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFIPPPKDKKKKDKEDD
GGEDDDANCNLICGDEYGPETKMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG
WNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETS
ITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR
ARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLREL
DALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKR
LGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQ
LKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRN
ALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDG
QIVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPNIISQLDPVNEHMLNMIRQIS
RPSAAGINLMIGSTRYGDGPRPPKMARYDNGGGYRRGGSSYGGGGYGSGGYGGAGGYAGS
GGYGSSGYAGGSNSYRGGYGGGYRGGVSGGYRGGSGGDYRGSSGGGYRGTGGFQRGVVRG
GYGSGYFGQGRGGGGY
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgttaaaaattttctgtatgcctggtgtggcaaaaggaagatgaccccatcc
tatgaaattagagcagtggggaacaaaaacaggcaaaaattcatgtgtgaggttcgagtg
gaaggttataattacattggcatgggcaattccaccaataaaaaagatgcacagagcaat
gctgccagagattttgttaactatttggttcggataaatgaagtaaagagtgaagaagtc
ccagctgttggggtagcacctcctccacccccacttactgatatacctgacaccgcagca
actacgggtggaggtttaccaacaaccatgggagggcctcttcctccacatttggctctt
aaggcagaaaataattctggaattggagcctctggctatggtcctcctgggcccacctgg
gatcgaggagccaacttgaaggattattattcaagaaaggaagaacaagaagtacaagcg
actttagagtcagaagaagtggatttaaatgctgggcttcatggaaactggacattagaa
aatgctaaggctcgtctgaaccagtatttccaaaaggaaaagatccaaggagaatataag
tacacccaagtgggtcctgatcacaacaggagctttattgcagaaatgaccatttatatc
aagcagctgggcagaaggatttttgcacgtgaacatggatcaaataaaaaactggcagca
cagtcctgtgccctgtcacttgtcagacaactctaccatcttggagtaattgaagcttac
tctggacttacaaagaagaaagaaggagagacagtggagccttacaaagttaacctctca
caagatttagaacatcagctgcaaaacatcattcaggagctaaatcttgagatcgtgccc
ccacctgatgatccttttatgcctgtcgtactgaatcttggcaaattggctcactttgag
ccatcccagcgacaaaaccaaatgggtgtggttccttggtcacctccacaatccaattgg
aatccttggactagtagcaacattgatgaggggcctctggcttatgctactccagaacaa
ataagcatggacctcaagaatgagttaatgtaccaactggaacaggatcacgatttgcca
gcaatcttacaggagagagagttgctgcctgtgaagaaatttgaaagtgaaatcttggaa
gcaattagtcaaaattcggttgtcattatccgaggcgctactggatgtggtaaaaccaca
caagttccacagtttattctagatgacttcatccagaatgaccgagcagcagagtgtaat
attgtagtaactcagcccaggagaataagtgcagtttctgtggctgaacgagttgcctat
gagagaggagaagagcctggaaaaagctgtggctatagcgttcgatttgagtctgtcctt
ccccgccctcatgccagtataatgttttgtactgtcggtgtgctcctaagaaaattagaa
gcaggcattcgaggaatcagtcacgtaattgtagatgaaatacatgaaagagacataaat
accgacttccttttggtagtattgcgtgatgtggttcaggcttatcctgaagttcgcatt
gttctcatgtctgctactattgacacgagtatgttctgtgaatatttcttcaattgcccc
atcattgaagtttatgggaggacttacccagttcaagaatattttttggaagactgtatt
cagatgacccactttattcctccaccaaaggacaagaagaagaaggataaggaagatgat
ggtggtgaggatgatgatgcaaattgcaacctgatctgtggtgatgagtatggtccagaa
acaaagatgagcatggctcagttgaatgaaaaggaaaccccttttgaactcatcgaagct
ctacttaagtacattgagacccttaatgttcctggagctgtgttggtttttttgcctggc
tggaatttgatttatactatgcagaagcatttggagatgaatccacattttggaagccat
aggtatcagattctacctctgcattctcagattcctcgagaggaacagcgcaaagtattt
gatccagtaccagctggagtaaccaaggttattttgtccacaaatattgctgagactagt
attaccataaatgatgtcgtttatgtcattgactcctgcaagcagaaggtgaagctcttc
actgctcacaacaatatgaccaactatgctacagtgtgggcatccaaaacaaaccttgag
cagcggaaaggacgagctggccgtgtgcggcctggattctgctttcacctatgtagccga
gctcgttttgagagactcgaaacccacatgacacctgagatgttccgaacaccattacat
gaaattgctttgagcataaaacttctgcgtctgggaggaattggacaattcctggccaag
gctattgaacctccgcctttggatgctgtgatcgaagcagagcacactcttagagagctt
gatgcattagatgccaatgatgagttgactcctctgggacgaatcctggctaaactcccc
attgagcctcgttttggcaaaatgatgataatgggatgtattttctatgtgggagatgct
gtctgtaccatctctgccgccacctgctttccggagcctttcattagtgaaggaaagcga
ctgggttatattcatcgaaattttgctggaaacagattttctgatcatgtggccctttta
tcagtcttccaagcttgggatgatgctagaatgggtggagaagaagcagagatacgtttt
tgtgagcacaaaagactcaatatggctacactaagaatgacctgggaagccaaagttcag
ctcaaagagattctgattaattctggatttccagaagattgcttgttgacacaagtgttt
actaacactggaccagataataatttggatgttgttatctctctcctggcttttggtgtg
taccctaatgtgtgctatcataaagaaaaaagaaagattctcaccactgaagggcgtaat
gcccttatccacaagtcgtctgttaattgtccctttagcagccaagacatgaagtaccca
tctcccttctttgtatttggtgaaaagattcgaacccgagccatctctgctaaaggcatg
accttagtcactcccctgcagttgcttctctttgcttccaagaaagtccagtctgatgga
cagattgtgcttgtagatgactggatcagactgcaaatatctcatgaggctgctgcctgt
attactgctctccgggcagccatggaggctctggttgttgaagtaaccaaacagcctaat
atcatcagccagttagaccctgttaatgaacatatgctaaacatgatccgccagatctcc
aggccctcagctgctggtatcaacctcatgattggcagtacacggtatggagatggtcca
cgtcctcccaagatggctcgatatgacaatggaggtggatatagacggggaggttctagt
tatggtggtggaggctacggcagcggaggttatggaggtgccggaggctatgctggtagt
ggaggctatggtagcagcggctacgctggtggctccaactcctatcgcggaggctatggc
ggaggctacagaggaggtgtcagtggtggctacagaggtggctcgggaggagactataga
gggtctagtggaggaggctacagaggaactgggggattccagcgaggggttgtccgaggg
ggctatgggagtggttactttggacaaggaagaggaggtggtggctattaa
DBGET
integrated database retrieval system
