KEGG   Ustilago maydis: UMAG_11196Help
Entry
UMAG_11196        CDS       T01021                                 

Definition
(RefSeq) putative DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
uma  Ustilago maydis
Pathway
uma03030  DNA replication
uma03410  Base excision repair
uma03420  Nucleotide excision repair
uma03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:uma00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    UMAG_11196
   03410 Base excision repair
    UMAG_11196
   03420 Nucleotide excision repair
    UMAG_11196
   03430 Mismatch repair
    UMAG_11196
Enzymes [BR:uma01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     UMAG_11196
    6.5.1.6  DNA ligase (ATP or NAD+)
     UMAG_11196
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     UMAG_11196
DNA replication proteins [BR:uma03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    UMAG_11196
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     UMAG_11196
DNA repair and recombination proteins [BR:uma03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     UMAG_11196
   NER (nucleotide excision repair)
    Other NER factors
     UMAG_11196
   MMR (mismatch exicision repair)
    Other MMR factors
     UMAG_11196
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 23567107
NCBI-ProteinID: XP_011392339
UniProt: A0A0D1CGK4
LinkDB All DBs
Position
20
AA seq 851 aa AA seqDB search
MTEQPKLAKFFGGGSSANTSASKPRQQDIKSAFAPKLAKPTSIETTINAATASSHEAEPI
TAATPLPSKRQASISNAIPNIPNSDPAAPHRKKRRIIESDDDEDEEPSLSPAQASTPASA
NKQPAPDASSSSKVASISAKPPPKTSIAANKGVISSANDATDSDSDSASEHIPNDLDDDH
EEEQAIQEEEQKGAKKLAAIFQMPSQVNEGKVTWKEGEAVPYAALATTFADIQATTKRLE
ITEILTQFLVRVIKRSPDNLLQVVYLCINRLCPDYEGLELGIGESLLIKAIAQSTGREVA
RIKKDLEAQGDLGLVALHSKKNQPTMFKVSSLKVPQVFKQLKEIALVSGNKSQDRKIGMI
KKLLASCQGDEPKFLIRSLEGKLRIGLAERSVLVSLARAVVIAKLGKTISKLSQESLAKQ
LEDATELVKAVYSELPSYDLVVPALLKGGVEHLRSECKLTPGVPLKPMLAKPTKAISEVL
DRFEGKPFTCEYKYDGERAQVHLLPNRQLAVFSRNSENMSVKYPDLVEQIPRCIKPTVKS
FVLDAEAAAWKKAQLNAEGILEPAKLLPFQELSRRKRKDVKAQDIKVKVKLFAFDLLFLN
GESLLSLPLSERRALLQSHFQPVDDEFDFARSEDCSSVEQISVFLDKSVKEGCEGLMVKM
LSGVDSTYEPSRRSMNWLKLKKDYLAGTGDSLDLVVIGGYYGKGKRTNVYGAFLLACYDS
DSETFQTICKIGTGFTEQDLESHYKTLKQLEISGKKGYYDVGEAKPDVYFEAKVVWEVLT
ADLSLSPVYTAAKGLVDQRGISLRFPRFIRIRDDKTAEESTSPEQIEAMYRSQVVNSSKG
KSGADDDDGFW
NT seq 2556 nt NT seq  +upstreamnt  +downstreamnt
atgacagagcagcccaagttagccaaattctttggcggtggcagcagcgccaacacatca
gcgtcaaagcctcgtcagcaagatatcaagtctgcttttgctccaaaactggccaagcca
acatccatagagaccacaatcaacgcagccactgcatcttcccacgaagccgagcctatc
accgccgccactcccttgccctcaaagagacaagcttccatcagcaacgccattccgaac
atccccaactccgacccagcagcaccacataggaagaagcgtcgcatcatcgaatcggat
gacgacgaggacgaggaaccgtcactgtctccggcgcaagcctcgacccccgcatccgca
aacaagcaacctgcaccggatgcatcatcgagcagcaaagtcgcctccatctctgccaaa
cctccgccaaagaccagtatagccgccaacaagggtgtcatctccagtgctaacgatgcc
acagacagcgactcggactctgccagcgagcacatccctaacgacctagacgatgatcac
gaagaagaacaggcaatccaagaagaagagcaaaagggtgccaaaaagcttgccgccatc
tttcaaatgccatcccaagtcaacgaaggcaaagttacctggaaagagggcgaggcggtc
ccctatgctgcgctagctaccacgtttgccgatatccaggctaccaccaagcgactcgag
atcaccgagatcctcacccaattccttgtgcgcgtcatcaagcgctcccccgataacctg
cttcaggtcgtctacctgtgcatcaaccgcctctgtcccgattacgaaggtctcgagctg
ggcattggcgaatcgttgctcatcaaagccatcgctcaatccaccggtcgcgaagtggct
cgcatcaaaaaggacctcgaagcccaaggcgatctcggcctggtagcgctccattcgaaa
aagaaccaaccgaccatgttcaaggtgtcgagcctcaaagttccgcaggtattcaagcag
ctcaaagaaatcgcccttgtgagcggcaacaagtcgcaagaccgaaagatcggcatgatc
aagaagctgctcgcttcatgtcaaggtgacgaacccaagttcctcattcgcagtctcgaa
ggaaaacttcgaatcgggctcgccgaaagatccgtactcgtctccctggcgcgcgccgtc
gtcatagccaaattgggcaaaaccatctcaaaactttctcaggaatccctcgccaagcag
ctcgaggacgcaactgagctcgtcaaggctgtctactcggaactgccctcgtacgatctg
gttgtaccggcattgctcaagggcggagtcgagcatctgcgtagcgaatgcaagctgacg
cctggtgtgccgctcaagccgatgcttgccaaacccaccaaagccatctctgaagtgctc
gaccgctttgaaggcaaaccattcacctgcgaatacaagtatgacggagaacgtgctcag
gttcatctgttacctaaccgtcaacttgccgtgttttcgcgaaactcggaaaacatgtct
gtcaaatatcccgatctggtcgaacaaattcctcgatgcatcaagcctaccgtcaaatcg
tttgtcctcgatgcggaagcagcggcgtggaaaaaggctcaactcaacgcggaaggcatc
ttggaaccagccaagcttctgccattccaagagctctcgcgtcgtaaacgcaaggacgtc
aaagcgcaagacatcaaggtcaaagtcaagctgtttgcgtttgatctgctcttcctcaac
ggcgagtctctgctctcgcttccgctctctgaacgacgtgcgctcctgcaatcgcacttc
caacccgtcgatgatgaattcgactttgctcgttccgaagactgtagtagcgtcgagcag
atttctgtctttctcgacaaatccgtcaaggaaggatgtgaagggttgatggtgaaaatg
ctttcaggtgtcgattccacctacgaaccgtctcgacgttccatgaactggttgaagctg
aaaaaggactatctggccggaacgggtgattccctggatctcgtcgtcattggaggctac
tacggcaagggaaagcgaaccaacgtctacggagcattcttgctagcatgctacgattcc
gattcggaaactttccagactatttgcaagatcggcaccggtttcaccgaacaagacctc
gaatcgcactacaaaacactgaaacagctcgagatctctggcaaaaagggctactacgat
gtcggtgaggcgaagccggatgtctactttgaagccaaagtggtatgggaggtgttgacg
gccgacctgagcctcagtcccgtgtatactgctgccaaaggactcgtggatcagagaggc
atcagtttgcggtttcccagattcatccgcattagagacgataagaccgccgaagagagt
accagtccagagcagatcgaggccatgtacagatcacaggtcgtcaacagcagtaagggc
aaaagtggagcagatgacgatgatggattttggtaa

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