Ursus maritimus (polar bear): 103660945
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Entry
103660945 CDS
T03271
Symbol
COL1A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr04151
PI3K-Akt signaling pathway
umr04510
Focal adhesion
umr04512
ECM-receptor interaction
umr04611
Platelet activation
umr04820
Cytoskeleton in muscle cells
umr04926
Relaxin signaling pathway
umr04933
AGE-RAGE signaling pathway in diabetic complications
umr04974
Protein digestion and absorption
umr05146
Amoebiasis
umr05165
Human papillomavirus infection
umr05205
Proteoglycans in cancer
umr05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103660945 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103660945 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103660945 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103660945 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103660945 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
103660945 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
103660945 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
103660945 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103660945 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
103660945 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
103660945 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103660945 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
umr00536
]
103660945 (COL1A1)
Glycosaminoglycan binding proteins [BR:
umr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103660945 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
103660945
NCBI-ProteinID:
XP_040496745
UniProt:
A0A8M1GNX0
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MFSFVDLRLLLLVAATALLTHGQEEGQEEEDIPPVTCVQNGLRYYDRDVWKPEACRICVC
DNGNVLCDDVICDETKNCPGAQVPPGECCPVCPDGEASPTDQETTGVEGPKGDTGPRGPR
GPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGP
SGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGE
RGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP
RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGS
EGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP
SGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGP
PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGS
PGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGP
PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGV
PGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGA
PGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGE
AGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP
AGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPXPQGNAGPPGPPGPAGKE
GGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLP
GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP
GRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPVGAR
GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP
GSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQP
PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM
CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVAQKNWYISKNPKEKRHV
WYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL
KKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAP
LDVGAPDQEFGMDVGPVCFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcgtagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagaagacatcccaccagtcacctgcgtacagaac
ggcctcaggtactatgaccgagacgtatggaaacccgaggcctgccggatctgtgtctgc
gacaacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgtcccggc
gcccaagtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctacc
gaccaagaaaccacaggagtggagggacccaagggagacactggcccccgaggtccaagg
ggacctgccggcccccctggccgagatggcatccccggccagcctggacttcccggcccc
cccggacctcccggcccccccggacctcctggcctcggaggaaactttgctccccaaatg
tcttacggctatgatgagaaatcaactggaggaatctccgtgcctggccccatgggtcct
tctggtcctcgtggtctccctggcccccctggcgcacctggtccccaaggtttccaaggc
ccccctggtgagcctggcgagcctggagcctcaggtcccatgggtccccgtggtccccct
ggcccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcctggtgag
cgtgggcctcctggacctcagggtgctcggggattgcctggaacagctggtcttcctgga
atgaagggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgct
ggtcccaagggtgagcccggtagccctggtgaaaatggagctcctggtcagatgggcccc
cgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgctcgtgga
aacgatggtgctactggtgctgctgggccccctggtcccactggccccgctggtcctcct
ggcttccctggtgctgttggtgctaagggtgaagctggtccccaaggagcccgtggctct
gaaggtccccagggtgtgcgtggtgagcccggcccccctggccctgctggtgctgctggc
cctgctggaaaccctggtgctgacggacagcctggtgctaaaggtgctaatggcgctcct
ggcattgctggcgctcccggcttccccggtgcccgaggcccttctggaccccagggcccc
agcggtcctcctggccccaagggtaacagcggtgaacccggtgctcccggcaacaaagga
gacactggcgccaagggagagcccggccccactggtattcaaggcccccctggccctgct
ggggaagaaggaaagcgaggagcccgaggtgaacccggacccactggcctgcctggaccc
cccggcgagcgtggcggacctggtagccgtggtttccctggtgcagatggtgtcgctggt
cccaagggtcccgctggtgaacgtggctctcctggccccgctggccccaaaggttcccct
ggtgaagcgggtcgtcccggtgaagctggtctgcctggtgccaagggtctgactggaagt
cctggcagccccggtccagatggcaaaactggcccccctggtcccgctggtcaagatggt
cgccccggccccccaggcccccccggtgcccgtggtcaggctggcgtgatgggattccct
gggcctaaaggtgctgctggagagcctggcaaggctggagagcgaggtgtgcctggcccc
cctggtgctgttggtcctgctggcaaagacggagaagctggggctcagggaccccctggc
cctgctggccccgctggcgagagaggcgaacaaggcccagctggctcccccggattccag
ggtctccctggccccgctggtcctcccggtgaagcaggcaaacccggtgaacagggtgtt
cctggcgaccttggtgcccccggcccctccggagcaagaggcgagagaggtttccccggt
gaacgtggtgtgcaaggtccccccggccccgcaggtccccgtggagccaacggtgcccct
ggcaatgatggtgctaagggtgatgctggtgcccccggagccccaggtagccagggcgct
cctggccttcagggaatgcctggtgaacgaggcgcagctgggcttcccggccctaagggt
gacagaggcgacgctggtcccaaaggtgctgacggttctcctggcaaagatggtgtccgt
ggtctgactggacccattggtcctcctggccccgccggtgcccctggtgacaagggtgaa
gctggtcctagcggccctgctggtcccactggagctcgtggtgcccccggagaccgtggt
gagcctggtccccctggccctgctggcttcgctggcccccctggtgctgatggccaaccc
ggtgctaaaggcgaacccggtgatgctggtgctaaaggcgacgctggtccccctggcccc
gctggacccactggaccccctggccccattggtaacgttggtgctcctggacccaaaggt
gctcgcggcagtgccggtccccctggtgctactggtttccctggtgctgctggccgagtc
ggtcccnccccccagggaaatgctggaccccctggcccccctggccctgctggcaaagaa
ggcggcaaaggcccccgtggtgagaccggccccgctggacgtcctggtgaagtcggtccc
cctggtccccctggccccgctggcgagaaaggatcccctggtgctgatggacctgctggt
gctcccggcactcctggacctcaaggcattgctggacagcgtggtgtggtcggcctgccc
ggtcagcgaggagaaagaggcttccccggtcttcccggcccctctggtgaacctggcaag
caaggtccttccggagcaagtggggagcgtggcccccctggtcccatgggcccccctgga
ttggctggaccccctggcgagtctggacgtgagggatctcctggtgctgaaggctcccct
ggacgagatggttctcccggccccaagggtgaccgtggtgagaccggccctgctggaccc
cctggtgcccctggtgctcctggtgcccctggccctgttggccccgctggcaagagcggc
gaccgtggtgagactggtcctgctggtcctgctggcccgatcggccccgttggtgctcgt
ggtcccgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggtgac
agaggcataaagggtcaccgtggcttctctggtctccagggtccccctggtcctcccggc
tctcctggtgaacaaggtccttctggagcttctggtcctgctggtccccgaggtccccct
ggctctgcaggttctcctggcaaagacggactcaacggtctcccaggccccattggcccc
cctggtcctcgtggtcgtactggtgatgctggccctgttggtccccccggccctcctgga
ccccctggtccccccggtcctcccagcggcggtttcgacttcagcttcctgccccagcca
cctcaagagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtggtc
cgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaac
atccggagccctgaaggaagccgcaagaaccctgcccgcacctgccgggacctcaagatg
tgccactccgactggaagagcggagaatactggattgaccccaaccaaggatgcaacctg
gatgccatcaaggtcttctgcaacatggagacaggcgagacctgcgtgtaccccactcag
ccccatgtggcccagaagaactggtacatcagcaagaaccccaaggaaaagaggcacgtc
tggtacggcgagagcatgaccgacggattccagttcgagtacggtggccagggctccgat
cctgccgatgtggccattcagctgacgttcctgcgcctgatgtccaccgaggcttcccag
aacatcacctatcactgcaagaacagcgtggcctacatggaccagcagaccggcaacctc
aagaaggccctgctcctccagggctccaacgagatcgagatccgggccgagggcaacagc
cgcttcacctacagtgtcacctacgacggttgcacgagtcacaccggagcctggggcaag
acagtgatcgaatacaaaaccaccaagacctcccgtttgcccatcatcgatgtggcacca
ttggacgtcggcgccccagaccaggaattcggcatggatgttggccctgtctgcttcctg
taa
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