KEGG   Ursus maritimus (polar bear): 103665003
Entry
103665003         CDS       T03271                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
umr  Ursus maritimus (polar bear)
Brite
KEGG Orthology (KO) [BR:umr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:umr03400]
    103665003 (MDC1)
DNA repair and recombination proteins [BR:umr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    103665003 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 103665003
NCBI-ProteinID: XP_008691134
UniProt: A0A384C9I8
LinkDB
Position
Unknown
AA seq 1949 aa
MEDTQAVNWEVEEEEETETPNESLGCSLEPVGRLHIFSSAHGPEKDFPLYLGKNMVGRMP
DCSVTLPFSSISKQHAVIEITAWDKAPVLQDCGSLNGTQVLRPPKVLSPGVSHRLRDQEL
ILFADLPCQYHRLNVPLPFVSRGFLTVEETPRVQGGTQPQRLLLAEDSEEEVDSPSERCV
MKEPRTSSLAAVVPESDEEGPSPAPDGPGLPFAFNLDSDTDEEESQHPAAGEASLAARTG
STAETEQPKVLATEIQLEKDQCSVKERNNDTKVEKDARNEVVPLGATLERNQTAGEDSDT
DMDESRPAGLHLERAQASGVIDSDTDVEEEGIPATPAVVPIKKRQIFHGVSTESPQAPAL
VHLQESPTGSDTDVEQSELQLAVPPERNQASVVIDSNTDDEEEVLAALTLARLKESRANT
WKRDTDVEEDRAQPVALLEQSQTSAGRDSDTDVEEEGIPMEKRGTVPKCHTDKAHSEKRQ
SPLRDSELGVDKDKSSLGVHLERSQASATVDINTQVEEKALSGPAVTLVGKHQVPMVWTS
QTDAEVEGGQAKLPVMHLEEAHPPPLGDCETDAEEGTSLAASVVADTGKCQLPAKRDAGT
EWAAAVLERERALEARAQGESLVSQVEQDLLPVSRENLIDLVVDTGTSGEPIQPQREGAQ
TPTERERDPHGNKTKDFGDNHGDSEDLDLQATQCFVERENQSPEAVQSMEDEATQAFLVT
LPQEPGPSCCSFQAPGALDEPWEVLATQPFCPRESEASEPQPIAAHLDAHGSCPSTPRTT
PQAQHPEGPIHEEPLGIQGRGMQTVQKDMGTPREAVEGVAPERGPLNRETKNLPAGERED
MIEEEALTRGIRVLARDNQGQESDQKVKSASIKRNMESLNIEIEIPNEVQEEGIGKQTLA
REIFEREAEKLVLERGGEPSGLGIEVPEVKLERGPQRGETGKGSQDQEEQASSLTSEPRA
GTGDHQGLASAPGASGSQSGGAPMSPRRQQRGHVTCKMPPADKASVGDQESADACLPPAV
PEASTPHQNPLLSQSQKHPVPQSFLSPSLSSLEPIPRTTQHGNQEVPETPLSSEMEPLHP
KSKVRLRGSSRKTPSAISSLALEPHSTSPTDQPLSPKLTSRVTRGRTHRSSVKTPDPVVP
TAPELQISTSKDQPVTSESTLQVTRSRTHRFSVKTPELVVPMVPEVQPSTSKEQPVTAEL
ISPGRTRKSVKIPEPVVSPATRGKAHRSSVKTPKPVIPTATELQPSTSKDQSVTPEPISR
VTWGRTRRSSVKIPEPTVPTVPELQPSTSKDQSITPEPTSQVAWGRTRRSSVKTPEPTVS
TAPELQPSTSKDQSVITEPTSGATHSRTHRSSVKTPEPIIPTAPEVQPSIPTDQPVIPKP
TSQVRTPRSAKTPDPIVPTALDLQPTTPGGQPVTPKRTSRGRTPRSSSKTPKSVVPTVPE
LQTSTPTDQPVTPKLTSQATRGRTQRSSIKTPEPVAPTAPEQPSISTDQPVTPEPTSRAT
RGRTHRSFVKIPQPTEPTAPDLESLTPTDRLVTPKAQGSQGKTLRSSTVSALPVLTNPEF
QSPVPTDQPIPPEPIPQATCSRRLRATRKHGSLTAPIVCEPSSALPEPKSRSSRNQRQGA
VRAVESLRTIPKPAFSQLPEAPTQATQIQNVEAAGGSELTPEPLPKAAQSRKRPLATVDK
PPLQKRLQRGEVTQKTVFLKEEEEDPTERPGKEEDVVVPGPGKRKRDQAKEEPKGIPSHN
LRRTKPNQESTAPKVLFTGVVDARGERAVLALGGSLASSVAEASHLVTDRVRRTVKFLCA
LGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEENFGFSLRDALSRAQERRLLEGYE
IHVTPGVQPPPPQMGEIISCCGGTVLPSMPRSYKPQRVVITCPQDFPRCSIPFRVGLPIL
SPEFLLTGVLKQEAKPEAFILSTLEMSSS
NT seq 5850 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctgttaactgggaggttgaagaagaggaggagacagagacaccc
aatgaatccttggggtgtagcttggagcctgtagggcgattgcatatcttcagtagtgcc
catggaccagaaaaagatttccccctatatctcgggaagaatatggtgggccgaatgcct
gattgctctgtgaccctgcccttttcatccatctccaaacaacatgcagtgattgaaatc
acagcttgggacaaggcacctgtcctccaagattgtggcagcctcaatggtactcaagtc
ctaaggcctcctaaggtcctaagcccaggggtgagtcatcggctaagggaccaggagttg
attctctttgctgacttgccctgccagtaccatcgcctgaatgtccctctgccctttgtt
tcccggggctttctaactgtagaagagacacccagggtacagggaggaactcaaccacag
aggctcctgttggctgaggactcggaggaggaagtagattctccttctgaaaggtgtgtg
atgaaagaaccaaggacctcctctttggcagcagtagttccagagagtgatgaagagggg
ccttctcctgccccagacggtcctgggctaccatttgccttcaacctggacagtgacaca
gatgaggaagaaagtcagcatccagcagcaggagaggcctccttggctgccagaacaggc
tccactgcagagacagaacagcctaaagttctggcaactgaaatccagcttgaaaaggat
cagtgttcagtgaaggagaggaacaatgacacaaaagttgagaaggatgcaaggaatgaa
gtggtcccacttggggccactctggagagaaatcaaactgctggggaggacagtgacaca
gatatggatgagagcaggcctgctgggctccatttggaaagggcccaggcttctggcgtc
atagacagtgatactgatgtggaagaagaagggatccctgcaaccccagctgtagttcct
ataaagaagaggcaaatctttcatggagttagtacagagagtcctcaggcacctgctttg
gtacatctacaggagagcccaactggtagtgatacggatgtggagcaaagtgagctccaa
ctggcagtccctccagagagaaaccaagcctccgtcgtgattgacagcaatacagatgac
gaggaagaagtcttagcagcgctcactttggcacgtctgaaagagagccgagccaataca
tggaagagagatacagatgtggaagaggacagggcccaacctgtggcccttctggagcaa
agccaaacctctgctgggagagacagtgacacagacgtggaggaggaggggatcccaatg
gaaaagagaggaactgttcccaagtgtcatacagataaggcacattcagaaaagaggcag
tctcctctccgagacagtgaactaggggtggacaaagataagagctcacttggggtccac
ctggagagaagccaggcctctgccacagtggacatcaacacacaagtggaggagaaggcc
ctgtcagggccagctgttacacttgtggggaagcatcaggtgcctatggtatggacaagc
caaacagatgcggaagtagaagggggccaagcaaagctgcctgtgatgcatctagaggaa
gcccaccctcctccacttggggactgtgagacagatgcagaagagggcacatccttagca
gcctcagtggtggcagatacaggaaagtgccagcttccggcaaaaagggatgctgggaca
gaatgggctgcagctgttcttgagcgggagagagctcttgaggcaagggcccagggtgag
tcccttgtgtcacaggtggagcaggatcttctccctgtgtccagggagaaccttatagat
ctggtggtggacacaggcacttcaggggaacccatccagccacagagagagggagcccag
acccccacagaaagggagagagacccacatgggaataagaccaaggactttggggacaac
catggtgattctgaagacctggacctacaggctacccagtgctttgtggagagagagaat
cagagcccagaagcagtccagagcatggaggatgaagccacccaggccttcctggttact
ttaccccaagagcctggcccttcctgttgcagtttccaggccccaggtgccctggatgag
ccgtgggaagtcttggcaacacagccattctgtccgagagagtctgaggcctctgagccc
cagcccattgccgcccaccttgatgcccatggatcttgcccctctacacctaggacaaca
ccacaagcccaacatccagagggcccaattcatgaagagccactggggattcaaggcaga
gggatgcagactgtgcagaaagacatgggtacaccaagagaagcagtagagggggtggcc
cctgagagaggaccattgaacagggaaaccaagaacctgccagcaggagagagagaagat
atgatagaagaagaagctttaaccagagggatacgggtgttagctagagataatcaggga
caagagtctgaccaaaaggtgaaaagtgcaagtattaaaaggaatatggagagtttaaac
atagaaattgagatacccaacgaagtacaagaggaagggataggaaagcagactcttgca
agagaaatatttgagagagaagcagagaaactagtactagagagagggggtgagccaagc
ggattaggcatcgaggtaccagaagtaaagctggagagaggcccacagagaggggaaaca
gggaagggaagccaggaccaggaagagcaggcttccagtttaacatcggagcctagagca
gggacaggggaccatcagggacttgcttcagccccaggagcttctgggagccagtcaggt
ggagccccaatgagccccaggaggcaacagagaggccacgtgacttgcaagatgccacct
gctgacaaggcctctgtgggtgatcaggaatccgcagatgcttgtctgcctcctgcagtg
cctgaagcctcaaccccacaccagaacccccttctctctcagagtcaaaaacatcctgtg
ccccagtccttcctttctccttctctatcttctttagagcccattcccaggaccacacaa
catgggaatcaggaagttccagagactcccttgtcatcagagatggagcctctccaccca
aaatccaaagtcaggctccgagggtcttccaggaagacaccctccgcaatttcttcttta
gcccttgaacctcattctaccagccccacagaccagcccctcagtcccaagctcacatct
cgggtcactcggggcaggacacataggtcctctgtcaagacccctgatccagttgtcccc
acagcccctgagctccagatttccacctccaaagaccagcctgtcacctctgagtccaca
ttgcaggtcactcggagtaggacacataggttctctgtcaagacccctgaactggttgtt
cctatggtccctgaagtccagccttccacctccaaagagcagcctgtcactgctgagctc
atatctccgggcaggacccgtaaatctgtcaagatccctgaaccagttgtctccccagcc
actcggggcaaggcacataggtcctctgtcaagactcccaaaccagttatccctacagcc
actgagctccagccttctacttccaaagaccagtctgtcacccctgagcccatatctcgg
gtcacttggggcaggactcgtaggtcctctgtcaagattcccgaaccaactgtccccaca
gtccctgaactccagccttccacctccaaggaccagtctatcacccctgagcccacatct
caggtcgcttggggcaggacacgtaggtcctctgtcaagactcctgaaccaactgtctcc
acagcccctgaactccagccttccacctccaaagaccagtctgtcatcactgaacccaca
tctggggccactcacagcaggacacataggtcttctgtcaagactcctgagccaattatc
ccaacagctcctgaagtccagccttctatccccacagaccagcctgtcatccccaaaccc
acatctcaggtcaggacacccaggtctgctaagacccctgatccaattgtccccacagcc
cttgacctccagcctaccacccccggaggccagcctgtcacccccaaacgtacatctcgg
ggcaggacacctaggtcttctagcaagacccccaaatcagttgtccccacggtccctgag
ctccagacttccacccccacagaccagcctgtcacccccaaactcacatctcaggcaact
cggggcaggacacaaaggtcctctatcaagacccctgagccagttgcccccacagcgcct
gaacagccttccatctccacagatcagcctgtcactcctgagcccacatctcgggccact
cggggcaggacacataggtcctttgtcaagatcccccagccaactgaacccacagcccct
gaccttgaatctctcacccccacagatcggctggtcacccccaaggctcagggtagtcag
ggtaagacactaaggtcttctacagtaagtgctctgccagttcttaccaaccctgaattc
cagtctcctgttcccacagaccagcctattccccctgagcccatccctcaagccacttgc
agcaggaggctgagggccactaggaagcatggatccctcacagctcccattgtctgtgag
ccctcctctgcactccctgaacctaaatctcggtcctcaaggaaccaaagacaaggagca
gtgagagcagttgagtccctcaggaccattcccaagcctgccttttcccagcttcctgag
gcccccactcaggctacccagatccaaaatgtagaggcagcaggcggatctgagctcacc
ccagagcccctgcctaaggccgctcagagtcgcaagaggcctttggctactgtggataaa
cccccacttcaaaaacggctccaaagaggagaagtcacccagaagacagtgttcctcaaa
gaagaggaagaagatccaacggagaggccagggaaggaggaggatgtagtggttccagga
ccaggcaagagaaagagagaccaagcaaaggaggagcccaagggaatcccaagccataac
cttcgacggaccaaacctaaccaagagtccacggcccccaaagtactcttcacaggagtg
gtggatgcccgtggagagcgggcagtgctggccctggggggaagtctggctagctccgtg
gcagaggcttcccacctggtaactgatcgagtccgacgcacggtcaagttcctctgtgcc
ctggggcgggggatccccatcctctccttggactggctgcaccagtcccgcaaggctggt
tgcttcttgcccccggatgaatatgtggtgactgatcctgagcaggaggagaactttggc
ttcagccttcgagatgccctgagccgggctcaggagcgaaggttgctggagggctatgaa
atccacgtgaccccaggagtccagccaccaccacctcagatgggagagatcatcagctgc
tgtggaggcaccgtactacccagcatgccccggtcctataagcctcagagagttgtgatt
acatgcccccaggacttccctcgatgctctattccatttcgggttgggctgcccatcctc
tcacctgagttcctgctgacaggagtgctgaagcaggaagccaagccagaggccttcatc
ctgtccactttggaaatgtcatcctcctga

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