Ursus maritimus (polar bear): 103678265
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Entry
103678265 CDS
T03271
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X5
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103678265 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
umr03000
]
103678265 (CNOT4)
03019 Messenger RNA biogenesis [BR:
umr03019
]
103678265 (CNOT4)
04121 Ubiquitin system [BR:
umr04121
]
103678265 (CNOT4)
Enzymes [BR:
umr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103678265 (CNOT4)
Transcription factors [BR:
umr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103678265 (CNOT4)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103678265 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103678265 (CNOT4)
Ubiquitin system [BR:
umr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103678265 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Rtf2
Nup35_RRM_2
Torus
zf-C3HC4
zf-UDP
Motif
Other DBs
NCBI-GeneID:
103678265
NCBI-ProteinID:
XP_008705823
UniProt:
A0A384DFP0
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAPTNANSLNSTFSVLPQRFPQFQ
QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
IAGEEEVKVSTMPLSASSHSLQQGQQPTSLHTTVA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgcgaaggaagaccctgtggaatgtcctctttgcatggagccc
ttggagatagatgatatcaacttttttccttgcacctgtggctatcagatttgccgattt
tgttggcaccgaattcgcactgatgaaaatggactttgtcctgcatgtaggaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagaattgcaaaggataaagaat
gagaaaaaacagaaacagaatgagagaaaacagaaaatatcagaaaaccgcaaacatttg
gctagtgtacgtgttgtacaaaaaaacctcgtctttgttgtaggtctctctcagcgccta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagtgccagtgcttat
gtaacctatatccggtcagaagatgctctcagagccatacagtgtgtcaataatgtggta
gtagatggcagaacacttaaggcatccctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaagcctgactgcatgtatctacatgaattgggggatgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaagcaccaagaatatgaacagaaacta
cttcaagaattatataagttaaaccccaattttcttcaactatctacgggttcagttgat
aagaataagaacaaagtgactccactgcagaggtatgatacccccattgacaaaccttca
gattctctcagtatagggaatggtgataattcccagcagatatctaacagtgatacgcct
tcaccaccacctggtttatcaaaatccaatccagtcatccccatcagttcatccaatcac
agtgcacggtctccttttgaaggggcagtaactgagtcacagtcgttattctcagataac
tttcgccatcccaacccaatcccaagtgggcttcctcctttccccagctccccacagaca
tccagtgactggcctacagcaccagagccacagagtctcttcacatcagaaacaatccca
gtatcatcctctacagactggcaagcagcatttggcttcggttcttctaaacaaccagag
gatgacttgggttttgatccctttgatgtcactcgaaaagccttagcagacctgattgaa
aaggaactgtcagtccaagaccagccttccctttcgcccacatctcttcagaactcctct
tcacacactacaaccgccaaaggtccgggctctggattcctgcatcctgctgcaccgaca
aatgccaactctctcaatagtaccttttcagtcttgccacagaggttccctcaatttcag
cagcaccgagcagtttataattcattcagttttccaggccaggcagcccgctatccttgg
atggcctttccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaat
agtaatttcttggacttgaatctcccgccacagcacaacacaggtctgggagggatccct
atagcaggggaagaagaggtgaaggtttcgaccatgccactgtcagcctcttcccattca
ttacaacaaggacagcagcctacaagtctccacactactgtggcctga
DBGET
integrated database retrieval system
