Ursus maritimus (polar bear): 121100281
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Entry
121100281 CDS
T03271
Symbol
SOX1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
umr
Ursus maritimus (polar bear)
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
umr03000
]
121100281 (SOX1)
Transcription factors [BR:
umr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121100281 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
121100281
NCBI-ProteinID:
XP_040476756
UniProt:
A0A8M1F0G9
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGVAKANQDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYAHVN
GWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHNPQP
MHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAVRCRAPPRGGAHQNSAVAAAAAAAA
ASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGESGDPAAAAAAAAQ
SRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcctggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcggcggtggcggcggcggcggcggggtcgccaag
gccaaccaggaccgggtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcag
cggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctg
ggcgccgagtggaaggtcatgtccgaggccgagaagcgaccgttcatcgacgaggccaag
cggctgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccgcgccgcaag
accaagacgctgctcaagaaggacaagtactcgctggccggtgggctgctggcggccggc
gcgggcggcggcggcgcggccgtggccatgggcgtgggcgtgggtgtgggcgcggcggcc
gtgggccagcgcctcgagagcccgggcggcgcggcgggaggcggctacgcgcacgtcaac
ggctgggccaacggcgcctaccccggctcggtggcggcggcggcggccgccgcggccatg
atgcaggaggcgcagctggcctacgggcagcacccgggcgcgggcggcgcgcacccgcac
gcgcacccggcgcacccgcacccgcaccacccgcacgcgcacccgcacaacccgcagccc
atgcaccgctacgacatgggcgcgctgcagtacagccccatctccaactcgcagggctac
atgagcgcctcgccctcgggctacggcggcctcccctacggcgccgttcgctgccgcgcg
ccgccgcgcggcggcgcgcaccagaactcggccgtggcggcggcggcggcggcggcggcc
gcgtcgtcgggcgccctgggcgcgctgggttcgctcgtcaagtctgagccgagcggcagc
ccgcccgcccctgcgcactcgcgggcgccgtgccccggggacctgcgcgaaatgatcagc
atgtacttgcccgccggcgagagcggcgacccggcggcagctgcagccgccgcggctcag
agccggctgcactcgctgccgcagcactaccagggcgcgggcgcgggcgtcaacggcacg
gtgcccctgacgcacatttag
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