Undibacterium sp. KW1: UNDKW_0522
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Entry
UNDKW_0522 CDS
T08678
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
und
Undibacterium sp. KW1
Pathway
und02020
Two-component system
und02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
und00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNDKW_0522 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UNDKW_0522 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
und03021
]
UNDKW_0522 (rpoN)
Transcription machinery [BR:
und03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNDKW_0522 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
TraG_N
HTH_IclR
HTH_Crp_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BBB58795
UniProt:
A0A6N4SYP4
LinkDB
All DBs
Position
complement(562345..563814)
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AA seq
489 aa
AA seq
DB search
MKQSLQLRTSQHLALTPQLQQSIRLLQLSTLELHQELETLLTDNPMLERVDDPLDHAVRL
LADGAINTSSTSADAGMEAPAAREDSDRSAEPATADAETVISNDSTTSSEEDWGFDDVQH
GSKSGDDEDGRPQLGAAHITLREHLLEQMRLNLREPRDRALVELMIDALDNNGYLTETLD
EIHASLPLELCVEPEELAFALNMLQSFDPAGVGARSPSECLALQIRRLPKVAFVTRRLAL
QIVETQLALFAQRDFTKLKKIFDCDDEDLRDAQTVIRLCKPRPGLAFAADESDYVVPDVI
VRKSGNGWQVMLNQDVMPRLRVSSMYANIMKQNRGEAGMGAQLQEARWLIKNMRQRFETI
LRVAQAIVERQRNFFTHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELK
YFFGSHVATETGGEASSTAIRALIKQLIGAEDQKSPLSDSKIADMLGEQGMVIARRTVAK
YREALKIPQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaagcctgcaactacgtacctcacaacatctggccttaacgccgcaattgcag
caatcgatacgattattgcagttatccactttggaattgcatcaggagctggagacgctg
ctgaccgataatcccatgctggaacgcgtcgatgatccactcgatcacgccgtacgcctg
cttgccgacggcgccatcaataccagcagcacttctgccgatgccggcatggaagcaccg
gcagcaagagaagacagtgacaggtcagcagaaccggctaccgctgatgcagaaaccgtc
atcagcaatgacagcaccacctccagcgaagaagactggggctttgatgatgtgcagcat
ggcagcaagtctggcgatgatgaagatggccgcccccagcttggtgcagcccatatcacc
ctgcgtgaacacttgctggagcagatgcgcctgaacctgcgcgaaccgcgtgaccgtgcc
ctggtcgagctgatgatcgatgcgctcgacaataacggttacctgaccgaaacattagat
gaaatacatgccagtttgccactggaactgtgcgtagaaccagaagaactggcgtttgcg
ctgaacatgctgcaaagctttgacccggcaggtgtcggtgcgcgcagcccgtctgaatgc
ctggccttgcaaatcaggcgtttaccaaaagttgctttcgtcacacgcaggctggcattg
caaattgttgaaacgcaactcgctttatttgcacaaagagatttcaccaaactcaagaaa
atcttcgactgcgacgatgaagatttgcgcgatgcacaaactgtcatccgcctgtgcaaa
ccacgccccggcctggcctttgctgctgatgaatctgactatgtcgtacctgatgtgatc
gtcagaaaatccggtaacggctggcaagtcatgctgaatcaggatgtcatgcccaggctg
cgggtaagcagcatgtatgccaacatcatgaagcaaaaccgaggcgaggctggcatgggc
gcgcaattgcaggaagcccgctggctgatcaagaatatgcggcaacgttttgagactata
ttgcgcgttgcacaagcgatagtcgaaaggcaacgcaattttttcacccacggtgctgtt
gcaatgcgcccccttgttttgcgcgaaattgctgatacactaggattacacgagagcact
atctcacgtgtaacaacccaaaaatacatgttgaccccacatggcatgtttgagttgaag
tactttttcggcagccatgtcgcgacggaaacagggggtgaagcatcttccaccgcgata
cgtgcactcatcaagcagttgataggagcagaagaccagaaaagcccactctctgatagc
aaaattgcagacatgctgggtgaacagggcatggtaattgcccgacggacagttgccaaa
taccgtgaagccctcaaaatcccccagtga
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