Undibacterium sp. KW1: UNDKW_1456
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Entry
UNDKW_1456 CDS
T08678
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
und
Undibacterium sp. KW1
Pathway
und02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
und00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UNDKW_1456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
und03021
]
UNDKW_1456
Transcription machinery [BR:
und03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNDKW_1456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF4238
GerE
Motif
Other DBs
NCBI-ProteinID:
BBB59729
UniProt:
A0A6N4T0Z0
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Position
1648537..1651134
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AA seq
865 aa
AA seq
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MTVSKTDKTAEQKGVAKDVKAPKVIKTSLAAETVKVTQATKQATSKAVLKTATKAKDTDE
ISASATKTAGKEVSGKNATPPAKKGSQPAEAAESQLSGKTRSASAARPEPVSVSSKASVT
INKTDSKTVTKPTKNSAKSAPEVQEIKTGSAPTVSQTTDAAVLAAIDTSGYVLPGVKVPG
RRGRKPKEYQPENEEIAALNAVERAEMKAIDKAKAKDRKAKEKALLKDAFSSDPEATEEE
LERRRQKLKTLIKLGKDRGYLTFAEINDHLPENVVDPEAIEGIIGTFNDMGVAVYEQAPD
AETLLLSDNVVTVTTDDDEVEAAAEAALSTVDSDFGRTTDPVRMYMREMGSVELLTREGE
IVIAKKIEEGLKDMIQAISACPTTIAEILAAADRIAADEIKIDEIVDGLVDPNADEQAAP
VVVAAAEESSEEDEEDEEEEEEEEDDDGGAAGAAAISAEQLEQLKRDALAKFEIIATNFD
KMRKSYEKEGYNSKTYVKAQEAISGELLGIRFTAKVVEKLCDTLRGQVDEVRHVEKQILE
VVVNRCGMPRSHFIKVFPGNETNLSWVEGEVNSGHSYSAVLGRNIPSVQQLQQKLIDLQS
RVVLPLPDLRNINKKMSAGEMKARKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGVEPDPATLAIKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDNHTL
APADAALHASMRNVVKDVLDSLTPREAKVLRMRFGVEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtcagtaaaacagacaaaacagcggagcaaaaaggggttgcgaaagacgttaaa
gcgcctaaagtgataaagacctcactggcagccgagaccgtcaaggtgacgcaggcaaca
aaacaggcaacaagtaaagcagtattgaaaacggcaacaaaagccaaagacacggatgaa
atatccgcgtctgcgacaaaaacggctggtaaggaagtgagcggcaagaatgcgacacca
ccggcaaaaaaagggagtcagccagcagaagcggccgaatcccagctcagtggaaaaacc
aggagtgcatctgcagcccggccagaaccagtatccgtatcatcgaaagcttctgtgaca
attaacaaaaccgattcaaagacagtgactaagccaaccaagaattcagcgaaatctgca
ccagaggtgcaggaaatcaaaaccggttctgcgcctaccgtaagccagacgaccgatgct
gcggtgcttgccgcgattgacacatccggctatgtattgcccggggtgaaggtgcctggc
cgccgtggtcgcaagccaaaagaataccagcctgagaatgaagaaatcgccgcactcaat
gcagtagagcgcgccgagatgaaagccatagacaaggccaaggcaaaagaccgcaaggcc
aaagaaaaggctttgctcaaagatgccttctcttctgatcctgaagcgacagaagaagaa
ctcgagcgccgtcgccagaaactgaaaaccctgatcaaactgggtaaggaccgtggctac
ctgacgtttgcagaaatcaacgatcatttgccagaaaacgttgttgaccctgaagccatc
gagggcatcatcggtaccttcaacgacatgggcgtggccgtctacgagcaagcccctgat
gctgaaaccctgttgttatcggataacgtcgtcactgtcacgaccgatgatgatgaggtt
gaggccgctgctgaggctgcactgtctacggttgactctgattttggtcgcaccactgac
cctgtgcgcatgtatatgcgtgaaatgggttcggtcgagttgctgacgcgcgaaggcgaa
atcgtcatcgcgaagaaaatcgaagaaggcctgaaagacatgatacaggcgatttctgcc
tgtccaaccacgattgcagaaatcctcgctgcggcggatcgtatcgctgccgatgaaatc
aagatcgatgaaatcgtcgatggcctggttgatccgaatgcggatgagcaggctgcaccg
gtagtggtcgctgctgccgaagaatcgtctgaagaagatgaagaggacgaagaggaagaa
gaggaagaagaagacgatgatggcggtgccgctggcgcagctgcaatctctgctgagcaa
ctcgaacaactgaagcgcgatgctctggcaaaattcgaaatcattgcgacgaattttgac
aagatgcgcaagtcctacgaaaaggagggctataactccaagacttacgtcaaggcgcag
gaagcgatttccggtgagctgctgggcatacgctttaccgcaaaagtcgttgaaaaattg
tgcgataccttgcgtggtcaggttgatgaagtccgccatgtagaaaaacagatactcgaa
gtggtggtcaatcgttgcggcatgccacgttctcacttcatcaaggtttttcctggtaat
gaaaccaatctgagctgggtggaaggcgaagtgaattccggtcattcctacagtgcagtg
ctgggccgtaatatcccttcagtgcaacaactgcagcaaaaactgatagacctgcaatcc
cgtgtcgtcctgcctttgcctgatctgcgcaacatcaacaaaaagatgtctgccggtgaa
atgaaggcacgcaaagccaagcgtgaaatgacagaggccaacttgcgtctggtgatttcg
atcgccaagaaatacacgaatcgtggtttgcaattcctggatctgattcaggaaggcaat
atcggtttgatgaaggcagtcgataagtttgaataccgtcgtggttataaattctcgacc
tatgcaacatggtggatacgtcaggccattacccgttctatcgccgatcaggcacgcacg
attcgtattcctgtgcatatgatagaaacgattaataaaatgaatcgtatctcgcgtcag
attttgcaagagacaggtgtagagcctgatcctgcaacgctggcgatcaagatggaaatg
ccggaagataaaattcgcaagatcatgaagattgcgaaagagccgatttccatggaaaca
ccgataggcgacgatgatgattcccatctgggcgatttcatcgaagacaatcacacattg
gcgccagccgatgctgccctgcacgcatcgatgcgcaatgtagtaaaagacgtgctcgac
tccttgacgccgcgcgaagcaaaagtattgcgcatgcgttttggcgttgaaatgtccacg
gatcataccctcgaagaagtaggtaaacaatttgacgtgaccagggaacgtattcgccag
atagaagccaaggctttgcgaaaattgcgccatccatcacgctcggataagctcaagagc
ttcctcgaaggtaattaa
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