KEGG   Uncinocarpus reesii: UREG_01737
Entry
UREG_01737        CDS       T01132                                 
Name
(RefSeq) histone deacetylase RPD3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ure  Uncinocarpus reesii
Pathway
ure03082  ATP-dependent chromatin remodeling
ure03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    UREG_01737
   03083 Polycomb repressive complex
    UREG_01737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ure03036]
    UREG_01737
Enzymes [BR:ure01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     UREG_01737
Chromosome and associated proteins [BR:ure03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     UREG_01737
   HDAC complexes
    Sin3A-HDAC complex
     UREG_01737
    BRAF-HDAC complex
     UREG_01737
    REST complex
     UREG_01737
    SHIP complex
     UREG_01737
    MiDAC complex
     UREG_01737
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     UREG_01737
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    UREG_01737
  Chromatin remodeling factors
   NuRD complex
    UREG_01737
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 8438786
NCBI-ProteinID: XP_002542221
UniProt: C4JJD0
LinkDB
AA seq 630 aa
MAGLGPIDLSMTNGAAEKKRVAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKK
MEIYRAKPATRLEMTQFHTDEYIDFLSKVTPDNMEGFQKEQQRYNVGDDCPVFDGLFEFC
GISAGGSMEGAARLNRGKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRV
LYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGAGRYYAVNVPLRD
GIDDISYKGIFEPVIKNVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKG
FGLPTMILGGGGYTMRNVARTWSFETGLLVGDQLPTELPYNDYYEYFSPDYELDVRPSNM
DNNNSREYIDRIRTQVIENLKRSAHAPSVQMTDVPRDALVDGMDDEADAILDDLDEDENK
DKRFTKRRFDQYIEKDGELSESEDEELAAANGVRRQPNGIKRRNQVSYENLEPESGINSG
VATPRDASSVADDDGILDEKMEDVADTDVQDKRSPTPTAEPSTRSESRMDTEDTSVVDLP
TTATAELEEKGPVASPPASRQESLQPNGVGNTMMDTTMEDVTPTQEPSEPPTAAGEALVA
TPPKSPQPEDSNLSHATPPARTEEPSTNAE
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggctggcctcggccccattgatctgtccatgacgaatggtgcagcggagaagaaacga
gttgcatacttctacgactctgatgttggtaattatgcttacgtcgcggggcatcctatg
aaaccccatcggatccgaatgacccatagtttggtgatgaattatggcttgtacaagaag
atggagatctatcgcgctaaacctgccacccggcttgaaatgacccagtttcacactgat
gaatatatcgatttcctgtcaaaggttactcctgataacatggagggctttcaaaaggaa
cagcaacgttataacgtcggcgatgactgtcccgtgtttgatggacttttcgagttttgc
ggaattagtgcgggtggctccatggagggggctgcacgtctcaataggggaaaatgcgat
attgctgtcaactgggctggtggcttacatcacgcgaaaaagagcgaagcaagcggcttt
tgctacgttaacgacatcgtcctgggaattctcgagctccttcggtttaaacagcgcgta
ctttatattgatattgatgtacaccatggagatggcgttgaagaagcgttctacacgacc
gaccgtgtgatgaccgtttcatttcacaagtacggcgagtacttccctggcactggagag
cttcgcgatattggcgtaggtgccggtagatattatgcggtgaacgttcctcttcgcgat
ggcatcgatgacatctcatacaaaggtatttttgaaccagttatcaagaatgtcatggaa
tggtatcgccctgaggctgttgtccttcagtgcggaggtgatagtttatctggtgaccgt
cttggttgcttcaatttgagtatgcgaggtcacgccaattgcgtgaagtacgtcaaaggc
tttggccttcccacaatgattctagggggtggcggttacacgatgaggaacgttgcccgg
acgtggtcgtttgaaaccggacttcttgtcggggatcaactgcctacagagttgccatac
aatgattactatgagtatttttcacctgattacgaactggatgtccgcccttcgaacatg
gacaacaacaactcgagagagtatatcgacaggattcgaacccaagtcattgagaatctc
aagcgttcggctcatgcaccttccgtgcaaatgaccgatgttccccgtgacgccttggtc
gacggtatggatgacgaagctgatgcgatcctcgatgatttggatgaggatgaaaacaag
gataagagattcacgaaacggcgattcgatcagtacattgagaaagacggtgaactcagt
gagagcgaagacgaagaacttgcagccgcgaatggcgttcgccgccagcctaatggcatc
aaaaggcgtaatcaagtcagctacgagaacttggagcctgaatctggaatcaacagcggt
gttgctacgccacgagatgcatcttcggttgcggatgacgatgggatcctagatgagaaa
atggaagatgtagcagacaccgatgtgcaagacaaacggtcgccgacccctaccgcagag
ccgtcaacccgatctgagtcaaggatggacacagaagacacatctgtggtagacctgcct
acaactgctactgctgaacttgaagaaaaggggccagtggcatcaccaccagcgtcaaga
caggaatcgttacagccgaatggggttgggaataccatgatggataccaccatggaagat
gtcacccccacacaagaaccgtccgagccaccgacggcggccggtgaggccttggtagca
acaccaccaaaatcaccacaaccagaagattcgaacctatcacacgcgactccgcctgca
aggactgaagagccctcgacaaatgctgagtaa

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