Uncinocarpus reesii: UREG_05063
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Entry
UREG_05063 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ure
Uncinocarpus reesii
Pathway
ure03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
UREG_05063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ure03400
]
UREG_05063
Enzymes [BR:
ure01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
UREG_05063
DNA repair and recombination proteins [BR:
ure03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
UREG_05063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
LIG3_BRCT
RTT107_BRCT_5
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
8443373
NCBI-ProteinID:
XP_002584374
UniProt:
C4JRH4
LinkDB
All DBs
AA seq
1009 aa
AA seq
DB search
MDGLNGPKGETEQELDEKYPNRPRNHHPTLPFHDLFLDLFNPLNENKKRPAGSTVARRKL
GPHGGQQTLSPQELRRDIIQRFISKWRNEVGDDIYPAFRLIIPEKDRDRAMYGLKEKTIG
KLLVKIMKIDKNSEDGFNLLNWKLPGQSMASRMAGDFAGRCYEVISKRPMRTEVGNMTVQ
EVNEKLDLLAAANKEDEQLPILEDFYRKMNPEELLWLIRIILRQMKVGATERTFFEIWHP
DAETLFSISSSLRRVCWELYNPNVRLEDEETGVTLMQCFQPQLAQFQMHSFQRMIEKMRL
SPEDPSFWIEEKMDGERMQLHMMSDDSITGGKRFKFWSRKAKDYTYLYGNGFYDENGALT
RHLKDAFADGVQNIILDGEMITWDPEQDAPVPFGTLKTAALSEQRNPFSATGQRPLFRAF
DILYLNDKALTRYTLRDRRKALEASIKPVHRRFEIHTYEVGYSAAHIEPQLRKVVAEASE
GLVLKNPDSPYRLNERHDDWMKVKPEYMTEFGESLDCVVIGGYYGSGKRGGALATFLCGL
RVDEAQIRQGANPMKCYSFCKVGGGFTAADYANVRHHTDSKWKDWDPKKPPTEFIELAGG
DAQYERPDVWIRPDESVVLCVKASSVTPSDQFRLGLTVRFPRFKRLRMDKTWESALSIQE
FMDLKSNAEREQKEKEFKIDNSRKRKPKRTTKKPLTIAGYDENKKAEFDVSDQIFTSKSD
SLVVMTDALEPEKKSKLELEKLIKANGGKIYQTNTAASNTICIAERRTVKVASIQKAAKE
NIVRPSWLLDCIKQNEADLGLPDLLLPLEPRHMYFTVKGQEQEISSNVDQYSDSYVRDTT
TKELTKLLASMPAISNLSASRISKIEDQMQSRHEQEGTFHDLPGWLFKNQVLYFSQSRSS
SDSKVSSSRLASNIARFAGASLVSKPDDKRVTHIILDKDSRSADVSALRSSISKRVGAGR
IPHIVTVEWINESWKAKTLLDEEQLLKGVHFEFRKVCIDAFYRSHISVS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggacggtctcaacggtcccaaaggagaaactgagcaggagctcgacgagaaatatcct
aaccgtccgcggaaccaccatcccactcttccctttcatgatttgtttcttgatcttttc
aaccccttaaatgaaaacaagaaaaggccagcggggtcaactgtcgcccgtagaaagctc
gggccacatgggggacagcaaaccctttctccgcaggaattgcggcgagatatcattcaa
cgtttcatttcaaaatggagaaatgaggtgggcgatgacatctacccagcttttcgattg
atcatccctgagaaagatcgggaccgtgcaatgtatggcttgaaagaaaagacaattgga
aaactgctggtcaagataatgaaaattgataaaaactccgaggatggcttcaacctcttg
aattggaagctcccagggcagagcatggctagtcgaatggcgggcgatttcgctggacgt
tgttacgaggtaatttcaaagcggcctatgagaacggaggttggcaacatgactgtccag
gaagtcaacgagaagctagacttattagctgctgccaacaaggaagacgagcagctacct
atccttgaagacttctacaggaaaatgaaccctgaggaactgttatggctcatcaggatt
attttgcgccaaatgaaagttggcgccaccgaacgtacgtttttcgagatctggcaccca
gatgcagagactctatttagcatatcgagcagccttcggcgggtttgctgggaattatac
aacccaaacgtccgcttggaggatgaagagactggggtaacccttatgcaatgctttcag
ccgcaattagcacagtttcagatgcattcgttccaacgaatgattgagaaaatgaggctg
tcaccagaagatccttcgttttggattgaagaaaagatggatggggagagaatgcagctt
cacatgatgtctgatgattccattaccggcgggaaaagatttaaattttggtcacgcaaa
gccaaggactacacttacctatatggaaatggtttttatgatgagaatggcgcattgacc
cgccatcttaaggatgctttcgcagatggggtccagaacatcattcttgacggagaaatg
atcacttgggacccagaacaagacgccccggttccttttggcacgcttaagactgctgca
ctatcagagcaacggaatcctttctccgccacaggccaaaggccactatttcgcgctttt
gatattctatatcttaatgataaggcgttaactagatacacattacgggatagaaggaag
gctttagaggctagcattaagcccgtgcatcgtcgcttcgaaattcatacctacgaggtc
ggttattctgctgcccatatcgagcctcaacttcgtaaggttgtggccgaagcttctgaa
gggcttgttctcaagaatcccgactcaccctatcgactgaatgaacgccatgatgattgg
atgaaagtgaagcctgaatatatgaccgaatttggtgaatcccttgattgcgtggtgatc
ggtggatactacggttcagggaagaggggtggtgcattagcaacctttctctgtgggctg
agggttgatgaagctcaaattcgacaaggcgctaatccgatgaaatgctactcattttgc
aaggtcggtggagggtttactgctgccgactatgcgaatgttcgtcatcataccgatagt
aaatggaaggactgggaccccaagaagccgccaacagaatttattgaattggctggtggc
gacgcacaatacgaacgtcccgatgtttggattagacccgatgagtctgtcgtactatgc
gtgaaagcatcctccgtaacccccagtgaccaatttcgattgggcttaactgtccgcttc
ccacggttcaagaggttgcgaatggataaaacttgggaaagcgcactgtcgatccaggag
tttatggatttaaagtccaatgctgaacgggaacagaaggagaaagaattcaaaattgat
aactcccggaaaagaaagcctaagagaacaacaaagaaaccccttaccattgcgggatat
gatgaaaacaaaaaagctgagttcgacgtatctgatcaaatattcacgtctaaaagtgat
tctctagtcgttatgaccgatgcgcttgaaccagaaaagaaatctaaacttgagctggaa
aaattgataaaagcaaatggtggcaagatctaccagacgaacacagcagcatcaaataca
atttgcattgcggagcgaaggaccgtgaaggtggcttcgatacaaaaagcggcgaaagaa
aacatcgttcgaccttcgtggctacttgattgcattaagcagaatgaagctgacctgggc
ctgccggatctattactcccattggagccaagacatatgtatttcaccgtgaagggccag
gagcaggagatttcctcaaacgtcgaccaatattcagacagctacgtacgagataccaca
acgaaggagcttaccaagctcctcgcctctatgcccgccatctcaaatctttcggcatcc
cgcatctcgaaaatcgaggaccagatgcaatcccgacacgaacaagaaggcacgtttcac
gacttgcccggctggctctttaaaaaccaagtattatacttttcacaatctagatccagc
tcagattccaaggtatcatcctcccgccttgcatccaatatcgctagatttgcgggcgcg
tcactggtgtctaaaccggatgataaacgtgttacgcacattatccttgacaaggatagc
aggtcggccgacgtctctgctttgcgatccagtatatcaaaacgtgtgggtgcaggtagg
ataccgcacattgtgactgttgaatggataaatgaaagctggaaggcgaaaacgttactg
gatgaagaacagcttttgaagggggtccattttgaattccgcaaagtgtgtattgacgcg
ttctatcgtagtcatatatccgtctcatag
DBGET
integrated database retrieval system
