Variovorax sp. PAMC 28711: AX767_00355
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Entry
AX767_00355 CDS
T04325
Name
(GenBank) DNA packaging protein
Organism
vaa
Variovorax sp. PAMC 28711
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Gene cluster
GFIT
Motif
Pfam:
Terminase_6N
Terminase_6C
Motif
Other DBs
NCBI-ProteinID:
AMM23002
UniProt:
A0A126ZC22
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Position
complement(62481..63947)
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AA seq
488 aa
AA seq
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MSAVLAPGQIRALKLEELGLLEEQHRRVIGNRLRQYRPYPKQAEFHAAGKTYRERLLKAG
NQLGKTWSAGFETAMHLTGRYPDWWAGRAWDRAVRSWGAGETTEVTRDSMQLILCGKLDH
IGTGAIPRDAIKDRSLKRGVSEAIDTLIVRHGGGGDLQAGESSFTFKSYDQGREKFQAAT
LDWVWLDEEPDMEIYTEALTRTNATGGCVALTFTPLKGMTGTVKRFLIDKVPGTHVTTMT
INDAEHYTPEQRAAIISSYPAHEREARVNGVPTLGSGRIFPIAEEAIKVPAMEIPAHWAR
IAGIDFGWDHPSAAVDLAWDRDTDVIYVTKAHRQREQTPLLFAATVKPWGDWLPWAWPHD
GLNETAAGGGKALKDQYAAHGLHMLAEKATHPPVPNDKGELIEGSGGNSVEAGVLDLLDR
MQTGRFKVFDHLGDWFEEFRMYHRKDGKIVKLDDDLMSATRYANMMKRFACTKPSPSKPI
VYRKRMIA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcagtgcttgcgcctggccaaatccgagcgctgaagctcgaagaactgggcctg
ttggaggagcagcatcgcagggttatcggcaacaggctgcgacagtaccggccgtaccca
aagcaggcggagttccacgccgctggcaagacttaccgggagcgattgctcaaagccggc
aatcagctgggcaagacatggtccgccggtttcgagaccgcgatgcacctcaccggccgc
tacccggactggtgggcaggtagggcgtgggaccgcgccgtgcgctcatggggcgctggc
gagacgaccgaggtcacgcgcgactctatgcaactgatcttgtgcggcaagttggatcac
ataggcaccggcgcgataccacgcgatgccatcaaggatcgctcacttaaacggggcgtc
tccgaggcgatcgacacactgatcgttcggcacggcggcggcggcgacttgcaggccggc
gagtcttcgttcaccttcaagagctacgaccaaggccgggaaaagttccaagcggccacg
ctcgattgggtctggctggatgaagagccggacatggagatctacacggaagcgctgaca
cggaccaatgcgactggcggatgcgtggcgctcaccttcacgccgctcaagggcatgaca
ggcacggtgaagcgcttcctgatcgacaaggtgcccggtacgcacgtcaccacgatgacg
atcaacgacgccgagcactacacgcccgagcagcgcgccgcgatcatcagcagctaccca
gcgcacgagcgcgaggcccgcgtgaacggcgtgccgacgctgggctccggccgcatcttc
cctatcgcagaagaggccatcaaggtgccggcgatggaaattccggcgcactgggcgcgg
atcgcaggcatcgacttcggatgggaccacccgagcgccgctgtcgacctggcatgggac
cgcgacaccgacgtgatctatgtgacgaaggctcaccgtcagcgcgagcagacgccgctg
ctgttcgcggcgaccgtgaagccgtggggcgactggctgccgtgggcctggccgcatgac
ggcctgaacgagacagcggcaggcggtggcaaggcgctgaaagatcagtacgcggcccac
ggcctgcacatgctggccgagaaggccacgcacccgccagtaccgaacgacaagggcgag
ctgatcgaaggctcaggcggcaacagtgtcgaggccggcgtgctcgatctgctggaccgc
atgcaaaccggccgcttcaaggtgttcgaccacctcggtgactggttcgaagagttccgg
atgtaccaccgcaaagacggaaagatcgtgaagctcgacgacgacctgatgagcgccaca
cgctacgcaaacatgatgaaacgcttcgcctgcaccaagccgtcgccgtccaaacccatc
gtgtatcgcaaacgaatgattgcctga
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