Variovorax sp. PAMC 28711: AX767_09190
Help
Entry
AX767_09190 CDS
T04325
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX767_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_09190
Enzymes [BR:
vaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AX767_09190
DNA repair and recombination proteins [BR:
vaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AX767_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AMM24506
UniProt:
A0A126ZBZ6
LinkDB
All DBs
Position
1833256..1834059
Genome browser
AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDVAGRFEDMAGLKGHFHF
AEKKGYAGTAIYTKHAPSEVIVGWGDAEFDAEGRYLELRFDTPTRKLSIISCYFPSGSSG
EERQAAKFRFLKGFFPHLNALKREREFILCGDINIAHQEIDLKNFKGNMKNSGFLPEERA
WMTRLLDAGTDGAGLVDVYRQLKPDTTGDAYTWWSNRGQAYAKNVGWRLDYHLATPALGA
LAREESIYKTVKFSDHAPITVDYDFSL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaaactgaccagcctcaacctcaatggcctgcgttcggccgctaccaaaggcgtg
gccgactgggtggccgaactcgcgccggattgtatttgcatgcaggagatccgcgtgcag
gcgagcgatgtggcgggccgtttcgaagacatggccggcctcaagggccacttccatttc
gccgaaaaaaaaggctatgccggcactgcgatctacacgaagcatgcacccagcgaggtg
atcgtcggctggggcgacgccgagttcgacgccgagggccgctacctcgaactgcgcttc
gacacaccgacgcgcaagctctcgatcatcagctgctacttcccgagcggctcgtcgggc
gaagagcgccaggccgccaagttccgttttctcaagggcttctttccgcacctgaatgcg
ctcaagcgcgagcgcgaattcatcctgtgcggcgacatcaacatcgcccaccaggagatc
gacctgaagaacttcaagggcaacatgaagaacagcggcttcctgcccgaagagcgtgcc
tggatgacgcgcctgctcgacgcgggcaccgacggcgcgggactggtcgacgtgtaccgc
caactcaagcccgacaccaccggcgacgcctacacctggtggagcaaccgcgggcaggcg
tatgcaaagaatgtgggctggcggctggactaccacctggcgacgccggcgctcggcgct
ctcgcacgcgaagaatcgatctacaagacggtgaagttcagtgaccatgcaccgatcacg
gtggactacgacttcagcctgtga
DBGET
integrated database retrieval system