Vibrio alfacsensis: D1115_00445
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Entry
D1115_00445 CDS
T05841
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00300
Lysine biosynthesis
vaf00470
D-Amino acid metabolism
vaf01100
Metabolic pathways
vaf01110
Biosynthesis of secondary metabolites
vaf01120
Microbial metabolism in diverse environments
vaf01230
Biosynthesis of amino acids
Module
vaf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D1115_00445 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D1115_00445 (lysA)
Enzymes [BR:
vaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D1115_00445 (lysA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXX99972
UniProt:
A0A347UM94
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Position
I:85903..87156
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEDVSLYALAEQYGTPLYVYSRATLERHWNAFDSSVGQHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNRVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
AVYQFAQSLPNLNVQGIDCHIGSQLTNIEPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLARLENHQELELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRDGEAQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGTQSHLVRQREELTSLWQLEQILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaattatcaggatgatggccagctttgggctgaagacgtctcactctat
gctcttgctgagcaatatggcacacctctttatgtatactcacgtgcgacactagagcgt
cattggaatgcattcgacagttcagtggggcagcacccacatcttgtttgttatgcagta
aaagcaaactctaacctaggtgtattgaatgctttggctcgtttggggtctggttttgat
attgtctcaggtggtgagctagaacgtgttatcgctgcaggtggcgatgcgaaaaaagtg
gtgttctctggcgttggtaagactccagcagaaatgaaacgtgctctcgagcttggcatt
aaatgctttaatgttgaatctgaacctgagctcgaacgcttgaaccgtgtggccggtgag
ttaggtgtgattgcaccgatttctttgcgtattaaccctgacgttgatgcgaaaacgcac
ccttacatttcgacaggtcttcgcgacaataaattcggcatcgcctttgaccgtgcgcct
gcggtgtatcaattcgcgcagagtttaccgaaccttaatgtacaaggtatcgattgtcat
attggctcccaactaaccaatatcgaaccatttattgatgcgacagaccgtctgttggca
ttgattgatgatttgaaagcacaaggcattaatattcgccatcttgatgttggtggtggt
ctaggcgtcgtttatcgcgatgaattacccccacagccctctgattacgccaaagcgcta
ttggcgcgtcttgaaaatcatcaagagcttgagcttatctttgagccaggacgggcgatt
gcagcaaacgctggtattttgctcacgcgagtagaattcctaaagcacactgagcacaag
aactttgcgatcatcgacgcagcgatgaatgatttaatgcgtcccgcgctatatcaagca
tggcaagatatcgtgcctgtctcaccacgtgatggtgaggcacaaacttacgatcttgtt
ggccctatctgcgaaacaggcgatttcttgggtaaagatcgagcgctagtgctgcaagaa
ggtgatctactcgcggttcgctctgcaggtgcctatggctttgtgatgtcttcgaactac
aatacccgtacccgagcggcggaagtgatggtggatggtacccaaagtcatcttgttcgc
cagcgtgaggagctgaccagtttgtggcagctggaacagattctaccggagtaa
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