Variovorax sp. PMC12: C4F17_00100
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Entry
C4F17_00100 CDS
T05380
Symbol
kdgD
Name
(GenBank) 5-dehydro-4-deoxyglucarate dehydratase
KO
K01707
5-dehydro-4-deoxyglucarate dehydratase [EC:
4.2.1.41
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00053
Ascorbate and aldarate metabolism
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
C4F17_00100 (kdgD)
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.41 5-dehydro-4-deoxyglucarate dehydratase
C4F17_00100 (kdgD)
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Ortholog
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GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
AVQ79467
UniProt:
A0A2P1V2Q6
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All DBs
Position
1:19916..20827
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AA seq
303 aa
AA seq
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MNPQELKTIMGSGLLSFPLTDFDANGDFNKSSYEKRLEWLAPYGASALFAAGGTGEFFSL
TGDEYPGIIKTAVDTCRGVVPIIAGAGGPTRFAIQCAQAAEKAGAHGILLLPHYLTEAGQ
EGLAAHVEAVCKSVNFGVIVYNRATSRLKPDTLAGLAERNPNLVGFKDGIGDIEAMVAIY
QKMGDRFAYLGGLPTAEVYAAAYKAMGTPVYSSAVFNFIPKTAMDFYKAVAADDLPTQHR
LLKNFFMPYLELRNRVPGYAVSIVKAGAKIVGHDAGPVRAPLTDLKPAEMEQLKALIDAL
GPQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcaagaactcaagaccatcatgggctccggcctgctctcgttcccgttgacc
gacttcgacgcgaacggggacttcaacaagagcagctacgagaagcgcctcgaatggctc
gccccctacggcgccagcgcgctgttcgcggccggcggcacgggcgaattcttctcgctc
accggcgacgagtaccccggcatcatcaagacggcggtggacacctgccgcggcgtggtg
ccgatcattgccggtgccggcggccccacgcgctttgccatccagtgcgcgcaggcagcc
gagaaggccggggcgcacggcatcctgctgctgccgcactacctcaccgaagccggccag
gaaggcctggccgcgcacgtcgaggccgtgtgcaagagcgtgaacttcggcgtgatcgtc
tacaaccgcgccaccagccgcctcaagcccgacacgcttgccggcctggccgagcgcaac
cccaacctcgtgggcttcaaggacggcatcggcgacatcgaggccatggtcgccatctac
cagaagatgggcgaccgcttcgcctacctgggcggcctgcccacggccgaggtctatgcc
gccgcctacaaggcgatgggcacgccggtgtattcgtcggccgtcttcaacttcattccg
aagaccgccatggacttctacaaggccgtggccgccgacgacctgcccacgcagcaccgc
ctgctgaagaacttcttcatgccctacctcgagctgcgcaaccgcgtgccgggctacgcg
gtgagcatcgtgaaggccggcgcaaagatcgtcggccacgacgccggccccgtgcgcgcg
ccgctcaccgacctgaagccggccgagatggagcaactcaaggcgctcatcgacgcgctc
ggcccgcagtaa
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