Variovorax sp. PMC12: C4F17_01360
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Entry
C4F17_01360 CDS
T05380
Symbol
cydC
Name
(GenBank) thiol reductant ABC exporter subunit CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_01360 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_01360 (cydC)
Transporters [BR:
vam02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
C4F17_01360 (cydC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_25
AAA_16
nSTAND1
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_33
AAA_28
MeaB
ATP-synt_ab
Zeta_toxin
NACHT
DUF87
Phage_holin_3_6
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AVQ79704
UniProt:
A0A2P1V3E2
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All DBs
Position
1:289258..290973
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AA seq
571 aa
AA seq
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MSARRNNTAQWRELRLVLRPFFAEQPRALLLGGLLAAVTVLAGMALLGLSGWFITATALA
GLHAATAFTFDVFMPSAGIRLLALGRTASRYGERLVTHDATFGVLASLRVRLFRGWAGPD
AARALLMRPARLLFRLTSDIDALESLYLRLLVPAAAALGAALLAGVVLGFMNAALGAALA
LWLVISGWGIALLVARRARWPAIRRAHAIEALRARAVDLVAGQTDLVMAGRIDAQREALM
RADAQLAKADLALNRLEAASGFAYGSAGTLTLVGVLLIVGTLVSEGLIGAPAAALALLVA
LTATEPFAALRRGALDAGRTWLAVRRLAPRMASSDDDAATAKPEGDAPFALQLKNVSVAH
PGSRTEVLSDVSLTLRAGERVAVVGASGAGKSTLLAAVAAELTPQAGHVSAQPACLLTQR
TELFQDSLRDNLRLADPAASDERLWAVLQAAGLDADVRALSTGLDTRLGEGGLGLSGGQS
RRLALARLLLRPVPLWLLDEPTEALDAAVAHDVLQCLAQHAGTRTLLIATHLRREAALAD
RLVCMRHGRIVADLRRGSDAFDAVLRGLRPD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgcagaaacaacactgcgcagtggcgcgagctgcggctggtgctgcgcccc
ttcttcgccgaacagccccgcgcgctgctgctgggtggcctgcttgctgccgtcaccgtg
cttgcggggatggcgctgctcggcctctccggctggttcatcacggccacagcactggcc
ggcctgcatgcggccacggctttcaccttcgacgtgttcatgccctcggccgggatccgg
ctgctcgcactgggccgaacggcttcgcgctacggcgagcggctcgtcacgcacgacgcg
accttcggcgtgcttgcgtcgctgcgcgtgcgcctgttccgtggctgggcggggcccgat
gcggcgcgcgccttgctgatgcgtccggcgcgcctgctgttccgcctcacgtcggacatc
gatgcgctcgaatcgctttacctgcgcctgctggtgcccgctgccgcggcgttgggcgcg
gcgttgctcgcgggcgtggtgctcggcttcatgaatgcggcgctgggcgcggcgctggcg
ctgtggctggtgatcagcggatggggcattgccttgctcgtggcgcggcgcgctcgttgg
cctgccattcggcgcgcgcacgccatcgaagccttgcgcgctcgagcggtcgatctcgtc
gcgggccagaccgacctggtgatggcaggccgcatcgacgcgcagcgcgaggcgctgatg
cgcgccgatgcgcaactcgccaaggccgatctcgcattgaaccggctggaggccgcttcc
ggcttcgcctacggcagcgcgggcacgctgaccctcgttggggtgctgctcatcgttgga
acgctcgtcagcgagggtctgatcggtgcaccggcggctgcattggcattgctggtggcg
ctcacggcgaccgagcctttcgcggcgctgcgccgtggcgcgctcgatgccgggcgcacc
tggcttgcggtgcggcgcctcgcaccgcgcatggcgtcttcagacgacgatgcagcgacg
gcgaagcccgaaggcgatgcgcccttcgcgttgcagttgaagaacgtcagcgtcgcgcac
cccggcagccgcacggaggtcttgagcgacgtgtcgctcaccttgcgcgccggcgagcgc
gtcgcggttgtcggcgcgagcggcgctggcaagtcgacgttgctggctgccgtcgccgcc
gaactcacgccgcaagccggccatgtgagcgcgcagccggcctgcctgctgacccagcgc
accgaactcttccaggacagcctgcgcgacaacctccgcctggccgaccccgccgcgagc
gacgagcgcctgtgggccgtgctgcaagccgccggcctcgacgccgatgtgcgtgccctc
tcgaccggcctcgacacccgtctcggcgaaggcggcctgggcctttccggcggccagtcg
cgccggctcgcgctggcccgcctgctgctgcgccccgtgccgctgtggctgctcgacgaa
ccgaccgaggcgctcgacgccgccgtcgcgcacgacgtgctgcagtgcctcgcgcaacac
gccggaacgcgcaccctgctgatcgccacgcacctgcgccgcgaggccgcgctggccgac
cggctcgtgtgcatgcggcacggccgcatcgttgccgacctgcgccgcggaagcgatgcc
ttcgatgcggtgctgcgcggcctgcgcccggattga
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