Variovorax sp. PMC12: C4F17_03950
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Entry
C4F17_03950 CDS
T05380
Name
(GenBank) aspartate aminotransferase family protein
KO
K01845
glutamate-1-semialdehyde 2,1-aminomutase [EC:
5.4.3.8
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00860
Porphyrin metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01240
Biosynthesis of cofactors
Module
vam_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
C4F17_03950
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_03950
Enzymes [BR:
vam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.3 Transferring amino groups
5.4.3.8 glutamate-1-semialdehyde 2,1-aminomutase
C4F17_03950
Amino acid related enzymes [BR:
vam01007
]
Aminotransferase (transaminase)
Class III
C4F17_03950
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AVQ80172
UniProt:
A0A2P1V4R9
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All DBs
Position
1:857576..858880
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AA seq
434 aa
AA seq
DB search
MTHAAIDQALADAYRRFTDANPASQRQFEAQARYMPGANSRSVLFYAPFPLTIARGEGAA
LWDADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERF
PQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPLPTTVPFDFL
VLPYNDAQTARAQIERHGPEIAAVLVEPMQGASGCIPGQPDFLQALRESATQVGALLIFD
EVMTSRLAPHGLANKLGIRSDLTTLGKYIGGGMSFGAFGGRADVMALFDPRTGPLAHSGT
FNNNVMTMAAGYAGLTKLFTPEAAGALAQRGEALRARLNALCANEGVAMQFTGIGSLMNA
HFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEGIYSSPRGFVVLSLPLTDADIDRCVAAIG
SFIGGHAALLPRAD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgccgccatagaccaggcccttgccgatgcgtaccggcgcttcaccgacgcc
aatccggccagccagcgccagttcgaggcgcaggcgcgctacatgcccggagccaacagc
cgctccgtgctgttctacgcgccgttccccctgaccatcgccaggggcgaaggcgccgcg
ctgtgggacgccgacggccatcgctacgccgacttcattgccgagtacacggccggtgtc
tacggccactccgcgccggaaatccgcgatgcggtcatcgaggcgatgcagggcggcatc
aacctcaccgggcacaacctgctcgaaggacggctggcccggctgatctgcgagcgcttt
ccgcagatcgagcagctgcgcttcaccaactcgggcaccgaggccaacctgatggcgctc
acggcggcgctgcacttcacggggcgcaggaagatcgtcgtgttctcgggcggctaccac
ggcggggtgctgggcttcggcgccaggcctttgccgaccaccgtgccgttcgactttctc
gtgctgccttacaacgacgcgcaaacggcccgcgcgcagatcgaacggcacggccccgag
atcgccgcggtattggtcgagccgatgcagggcgcgagcggctgcattccggggcaaccc
gacttcctgcaggccctgcgcgagtcggccacgcaggtcggcgcgctgctgatcttcgac
gaagtcatgacctcgcggcttgcgccgcatgggctggcgaacaagctcggcatccgttcg
gacctgaccacgctgggcaagtacatcggcggcggcatgtcttttggtgcgttcggcggg
cgcgccgacgtgatggcactgttcgacccgcgcaccggtccgctggcccattcgggaacc
ttcaacaacaacgtgatgacgatggcggccggctatgccggtctcacgaagctcttcacg
cccgaggcggccggtgcgctggcccagaggggcgaggcactgcgcgcgcggctcaacgcg
ctgtgcgcgaacgagggcgtcgccatgcagttcaccggcatcggctcgctgatgaacgcg
catttcgtgcagggcgatgtacgcagcagcgaagacctggcggcggtcgacggccggctg
cggcagctgctgttcttccacctgctgaacgagggcatctacagctcgccgcgcggcttc
gtcgtgctgtcgctgccgctgacggatgcggacatcgaccgctgcgtggccgccatcggc
agcttcatcggcgggcacgcggcgctgctgccccgcgcggactag
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