Variovorax sp. PMC12: C4F17_05100 Help Entry C4F17_05100       CDS       T05380                                  Name (GenBank) type I polyketide synthase Organism vam  Variovorax sp. PMC12 SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding ketoacyl-synt Acyl_transf_1 Aminotran_3 Ketoacyl-synt_C PP-binding KAsynt_C_assoc AMP-binding_C Thiolase_N Motif Other DBs NCBI-ProteinID:  AVQ80385 UniProt:  A0A2P1V5F5 LinkDB All DBs Position 1:1112162..1119472 Genome browser AA seq 2436 aa AA seqDB search MEIQSVSTSRRSAPDTLLEDLFVPRANPETPGGRHAVSMPLAPEFMQRRAQASATGGQLP DTLFAGAWLLLQSRWLGVLWPVLHELAGAKALHTSTTVAFDATRPAGAWIAELDAARRAA SAAATGAQPPVSLWLRDAADTAEPDARLRLWLDEASGSLHMDVAAALMDMACAERLLAAL ADTAADLLARPDAALDDIRTLPVADSHDQLVRWNTPPSALDRTLTVTGMFRRQAAAAPEA IAVAEGDVRMSYAELDRRSDQLARHLQQLGVRSGDGVGLLLDRSLGAVVALIGILKAGGA YVPVPTDFPPERIAYMFAEAQARHVITAQAFRHLVPAEQRALLLDDALDNEDRSSWNEPA IDGESVAYVMYTSGSTGTPKGIEICHRSILRLVVGVDYVELAPGRAMLHAAPLGFDAATL EIWGPLLNGGCCVVHDERVPTGAGLARTIARHDVHTAWLTAALFNAVIDDDPAHLAGLRH LFTGGEALSVPHVRRALAALPGLALSNGYGPTECTTFATTHRIAPTLPADTRSVPLGRPI KDTVLRVLSPSMALLPSGLVGELCIGGHGLARGYLRQPELSADRFVPDPFGGPADRLYRT GDLARWLPDGTIEFIGRRDGQVKIHGHRIETGEIEAAVLAHSGVQSCAVVARPDADGQLR LVAYLVARGPKLSWQALRTHLAARLPAALVPSAQVWLDQLPVTPNGKLDRRALPEPAAGR PELSQPYEEPHDAVEQQVCEAFARALCIDKVGRNDNFFDLGGDSLLVLQVLGELKRDTAL PLSTNLFFRDPTPKAMAARLRPPAEASVQAASQPSAPHAAAPASDAVALIATAGRFPGAA DVEQFWDNLVAGRDTITFFDDATLDAGVSQALRSDPSYVRARGVIDGIENFDAAFFGIGP KEAQLMDPQQRVFLEICWECLERAGYVPDAAPGPVGVYAGMYNATYFQRHVSTRPDLVEP VGEFQVMLANEKDYITTRVANRLNLTGPAVSVHTACSTSLVAVAHAFHALRTGQCYMALA GGASVTCPPRSGYLYNEGSMLSPDGHTRSFDAKAQGTVFSDGAAVVLLKRLADAQADGDT IYAVLRSASVNNDGGAKASFTAPSVDGQAAVIRAALAAAEVDARSISYVEAHGTATPMGD PIEVEALAVAYAEHTDALGYCTLGSLKSNVGHMVTAAGAAGLIKTALALHHGQIPPTVHF ETPNPAIDFARTPFQVTASLQPWPRVDLPRRAGVSSFGVGGTNAHVIVEEAPPRPASPIA TGEQVLPLSARSEAALAVAAEQLAAHLQAHAEQPLADVAHTLAVGRKAHAFRRVVVAADT VQAIEALRAADSPWRASGRLASRAPQPVLMFPGQGAQYAGMGRLLHAADPVFAAAFDDCI DAMAGATGFDLRERMFSDDPKALSPTAVTQPALFTIEYALARRLLATGVRPHALMGHSVG EFVAAVLAGVMRLEDAARLVARRGALMQALPAGAMLSVRIGAAELEQRLGASLSLAAENG PTACVAAGSFEAIAALQATLEAEGIACRALQTSHAFHSAMMDGAVAPFEALVGQVALNAP QTPIFSTLTGRLLEAQEATSPAYWARHLRGTVRFSPAVRAAMEHAAQPLFIEAGPRNTLS TLVRQHGASAAVPLLHGEPADEHRTLCLAVGRLWTCGAEVELSRLSSRTGAQRVRLPTSP FERKRFWVDIAAAPEAAGIAATAAIPAAPLSVSPAPSATPTPLEPIVTAAATSPLPSSAS SPPVDARLRALFEDISGIDMAQAEGHAPFGELGLDSLTLTQAATQIKKHFKVNLSFRQLM ENYRCFDALSAFLRESLPPEAAPVVAPVAAAEAPVVQQPVQALAPAPVAYAPMHGNAASS PISQLIAQQMELMRQQLALLSGTAPAAPVMPQAVQAPAVAAPVAAAPAAEEPAPSKEPLR YDVAKAFGAIARIHTQRTAEPSGRQKARLAAFMRRYIERTIKSKQFTEANRSHMADPRVV NGFRPVTKEITYQIVIERSKGSKMWDLDGNEYVDALNGFGMNMFGWQPDFVQDAVRRQLD AGYEIGPQHPLAADVTALICELTGSDRAGLCNTGSEAVMAALRIARTVTGRSTVVVFTGS YHGTFDEVLVRAGKGGKGLSAAPGVMSGMFGDIRVLDYGTPEALAFIRDNADDLAAVLAE PVQSRRPDFQPREFLHELREITAKSGCALIFDEVITGFRTALGGAQELFGVRADLATYGK VIGGGFPVGVIAGKREFMDALDGGAWQYGDDSIPGVGVTYFAGTFVRHPLALAAAKASLL HLKEAGPALQAGLTGSTSAMAAEMSAWCKEVGAPIEIRHFGSLWRVSWLEDHPLQDLLFA MMRSRGVHILDNFPCFLTSAHSAEDIAFIQRAFRESVAEMQESGFLPRRAAVVTSFDVRK PAEEGSVLARDVDGQPFWYVPEAQASTHHVNGKAAA NT seq 7311 nt NT seq  +upstreamnt  +downstreamnt atggaaattcaatctgtttcgacgtcacggcgcagcgctccagacacgcttctggaagat ctgttcgtgccgcgggcgaacccggaaacgccgggcgggcggcacgccgtctccatgccc ctcgcacccgaattcatgcaacgccgggcacaggcgtccgcaaccggtggccagttgccc gacaccctgtttgccggcgcgtggctgctgctgcagtcgcggtggctcggcgtgctctgg ccggtgctgcacgaactggcaggcgccaaggcgttgcacacgtccacgaccgtggccttc gacgccacccgccccgcgggcgcctggatcgcggaactcgatgccgcccgtcgcgcggcg agtgctgccgccaccggcgcgcagccgcccgtctcgctgtggctgcgcgatgccgccgac acggccgaacccgacgcccgcctgcgcctctggctggacgaagcctccggctccctgcat atggatgtggcggcggccttgatggacatggcctgcgccgagcgcctgctggccgcactc gccgacaccgccgccgatctgctggcccgccccgatgccgcgctggacgacatccgcacc ctgcccgtcgccgacagccacgaccagctcgtccgctggaacacgccaccgtcggcgctc gaccgcacgctcaccgtcaccggcatgttccgccgccaggccgccgccgcccccgaggcc atcgcggtcgccgaaggcgacgtgcggatgagctacgccgaactcgaccgccgctccgac cagctcgcgcgccacctgcagcagctgggcgtgcgaagcggcgacggcgtcggcctgctg ctcgaccgctcgctgggcgccgtcgtggcgctgatcggcatccttaaggcgggcggcgcc tacgttcccgtgccgaccgactttccgcccgagcggatcgcctacatgttcgcggaggcg caggcccgccacgtgatcacggcgcaagcctttcgccacctcgtgccggccgaacaacgc gctctgctgctcgacgatgccttggacaacgaagatcgcagttcatggaatgagccggcc atcgacggcgagtcggttgcgtacgtcatgtacacctcgggctcgaccggcacgcccaag ggcatcgagatctgccaccgctcgatcctgcggctggtggtcggcgtcgactatgtcgag ctcgcgcccggccgcgccatgctgcatgccgcgccgctgggcttcgacgcggccaccctt gaaatctggggtccgctgctcaacggcggctgctgcgtggtgcacgacgagcgcgtgccc accggtgccggcctggcccgcaccatcgcgcgccacgacgtgcataccgcctggctcacg gccgctctgttcaacgcggtgatcgacgatgacccggcccacctcgcgggcctgcgccac ctgttcaccggcggcgaggcgctctcggtgccccacgtgcggcgcgcgctcgccgccctg cccggcctggccctgagcaacggctacggcccgaccgagtgcaccaccttcgcgaccacc caccgcatcgcgccgacgctgcccgcagacacccgctccgtgccgctcggccgcccgatc aaggacaccgtgctgcgcgtgctgagcccctcgatggcgctgctgccctccggcctggtc ggggagctgtgcatcggcggccacgggctggcgcgcggctacctgcgccagcccgaactc agcgccgaccgcttcgtgcccgatcccttcggcggtccggccgaccggctctaccgcacc ggcgacctcgcgcgctggctgcccgacggcaccatcgaattcatcggccgccgcgacggc caggtcaagatccacggccaccgcatcgagaccggcgagatcgaagccgccgtcctcgcc cactccggggtgcagtcttgcgcggtggttgcccggcccgatgccgatggccagctgcgc ctggtggcgtacctcgtggcccgcggcccgaagctgtcgtggcaggcgctgcgcacgcac ctcgcggcccgactgcccgcggcgctggtgccttcggcgcaggtctggctcgatcaattg cccgtcacgcccaacggcaagctcgaccgccgcgcgctgcccgagcccgccgccggccgc cccgagctttcgcagccttacgaggagccgcatgacgccgtcgagcagcaggtgtgcgaa gccttcgcgcgcgcgctgtgcatcgacaaggtcgggcgcaacgacaacttcttcgacctc ggcggcgattcgctgctggtgctgcaggtgctgggcgagctgaagcgcgacaccgcgctg ccgctgtcgaccaacctgttcttccgcgacccgacgccgaaggcaatggccgcacggctg cgtcccccggcggaggcatccgtgcaggcggcatcgcagccgtccgccccgcacgccgcc gcgccggcttccgacgcggtcgcgctcatcgccaccgcgggccgctttcccggtgccgcc gacgtggagcagttctgggacaacctcgttgccggccgcgacaccatcaccttcttcgac gacgccacgctcgacgccggcgtgagccaggcgctgcgcagcgatccgtcctatgttcgc gcacgcggcgtgatcgacggcatcgagaacttcgacgccgccttcttcggcatcggcccc aaggaagcccagctcatggacccgcagcagcgggtgttcctcgagatctgctgggaatgc ctggagcgcgccggctacgtgcccgacgccgcgcccggcccggtcggcgtgtatgccggc atgtacaacgccacctacttccagcgccatgtaagcacccggcccgacctggtggaaccg gtcggcgaattccaggtgatgctggccaacgagaaggactacatcaccacgcgggtggcg aaccggctcaacctcaccggcccggccgtcagcgtgcacaccgcctgctcgacctcgctg gtggccgtggcccacgccttccacgcgctgcgcaccggccagtgctacatggcgctggcg ggcggcgcatcggtcacctgcccgccgcgcagcggctacctctacaacgagggctcgatg ctctcgcccgacggccacacgcgcagcttcgacgcgaaggcccagggcaccgtcttcagc gacggcgcggccgtggtgctgctcaagcgcctggccgacgcgcaggccgacggcgacacc atctacgccgtgctgcgcagcgccagcgtgaacaacgacggcggcgccaaggccagcttc accgcgcccagcgtggacggccaggcggcggtgatccgcgccgcgctggcggcggccgag gtcgatgcgcgcagcatttcctacgtggaggcgcacggcaccgccacgccgatgggcgac ccgatcgaggtcgaggcactggccgtggcctacgccgagcacaccgacgcgctcggctac tgcacgctgggctcgctcaagagcaacgtgggccacatggtcacggccgccggcgcggcg gggctcatcaagacggcgttggcgctgcaccacgggcagatcccgccgacggtgcacttc gagacgcccaacccggcgatcgacttcgcacgcacgcccttccaagtgaccgccagcctg cagccgtggccgcgcgtcgacctgccgcgccgcgcgggcgtgagctccttcggcgtgggc ggcaccaatgcgcacgtcatcgtcgaggaagcgccgccgcggccggcatcgcccatcgcc accggcgaacaggtgctgccgctgtcggcacgctcggaggctgcgctggccgttgccgcc gagcagctcgcggcgcacctgcaggcgcatgccgaacagccgctggccgacgtggcccac acgctggcggtcggccgcaaggcccacgccttccgccgcgtggtggtggcggccgacacg gtgcaggccatcgaggcgctgcgtgccgccgattcgccctggcgcgccagcggccggctt gcctcgcgcgcgccgcagccggtgctgatgttcccgggccagggggcgcagtacgccggc atgggcaggctgctgcacgcggccgacccggtgttcgcagccgccttcgacgattgcatc gatgccatggctggcgccaccggcttcgacctgcgcgagcgcatgttctcggacgacccg aaggcgctgtcgcccaccgccgtcacccagcccgcgctcttcaccatcgaatacgccctc gcgcggcggctgctggccaccggcgtgcggccccatgcgctgatgggccacagcgtgggc gagttcgtcgccgcggtgctcgcgggcgtcatgcggctcgaagatgcggcccggctcgtc gcccggcgcggcgcgctcatgcaggcgctgccggcgggcgcgatgctgtcggtgcgcatc ggcgcggccgagctggagcaaaggctgggcgcctcgctctcgctcgccgccgagaacggc cccacggcctgcgtcgccgccggctccttcgaggccatcgccgcattgcaggccacgctg gaagccgaaggcatcgcatgccgcgcgctgcagacatcgcacgccttccactccgccatg atggacggcgccgtcgcgcccttcgaggcgctggtgggccaggtggcgctgaatgcgcca cagacgccgatcttctcgaccctcaccggccggctgctggaggcgcaagaagccaccagc cccgcctactgggcacggcacctgcgcggcaccgttcgcttctcgccggccgtgcgcgcc gcgatggaacacgccgcgcagccgctcttcatcgaagccggtccgcgcaacaccctctcc acgctggtccgccagcacggcgcgagtgctgccgtgccgctgctgcacggcgagcccgcc gacgaacaccgcacgctgtgcctggccgtcggccggctgtggacctgcggcgcggaagtc gagctgtcgcgcctgtccagccgcaccggcgcccagcgggtgcgcctgccgaccagcccg ttcgaacgcaagcgcttctgggtcgacatcgccgccgctcccgaagccgccgggatcgcc gcgaccgccgcgatccccgccgcacctctttcagtctcgcccgccccttccgccacaccc acacctttggagccgatcgtgacagctgcagcgacctcgcctctcccttcctccgcgtcc tcccctcccgtcgatgcgcgcctgcgcgccttgttcgaggacatctccggcatcgacatg gcgcaggcggaaggccatgcgcccttcggcgagctcggcctggattcgctcacgctgacg caggcggccacccagatcaagaagcacttcaaggtcaacctgagcttcaggcagctgatg gagaactaccgctgcttcgacgcgctctccgcgttcctgcgcgagagcctgccgcccgaa gccgcgccggtcgtggcgcccgttgcagcggctgaagcgcccgtggtgcagcagcccgtt caagccctggcgcccgcaccggtggcgtacgcacctatgcacggcaacgcggcctccagc ccgatctcccagctgattgcgcagcaaatggaattgatgcgccagcagctcgccctgctc tcgggcacggcgcccgccgcgccggtcatgccgcaggcagtgcaggcgccggccgtcgcc gcaccggtcgcggcggcacccgccgccgaagagcccgcgccgtcgaaggagccgctgcgc tacgacgtcgccaaggccttcggcgccatcgcccgcatccacacccagcgcacggccgag cccagcggccgccagaaggcccggctcgcggcgttcatgcgccgctacatcgagcgcacc atcaagagcaagcagttcaccgaggccaaccgctcgcacatggctgacccgcgcgtggtc aacggcttccgcccggtcaccaaagagatcacctaccagatcgtcatcgagcgttccaag ggctcgaagatgtgggacctggacggcaacgaatacgtcgacgcgctcaacggcttcggc atgaacatgttcggctggcagcccgacttcgtgcaggacgccgtgcgcaggcagctcgac gcgggctacgagatcggcccgcagcatccgctggccgccgacgtcaccgcgctcatctgc gagctcacgggcagcgaccgcgccggcctgtgcaacaccggctccgaggccgtgatggcg gcgctgcgcattgcgcgcaccgtcaccggccgcagcacggtggtggtgttcaccggctcc taccacggcaccttcgacgaagtgctggtgcgcgccggcaagggcggcaagggcctgtcg gccgcgccgggcgtgatgagcggcatgttcggcgacatccgcgtgctcgactacggcacg ccggaggcgctggccttcatccgcgacaacgccgacgacctggccgccgtgctggccgag ccggtgcaaagccgccggcccgacttccagccgcgcgagttcctgcacgagctgcgcgag atcaccgccaagagcggctgcgcgctgatcttcgacgaggtcatcaccggtttccgcacc gcgctgggcggcgcgcaggagctgttcggcgtgcgcgccgatctcgccacctacggcaag gtgatcggcggcggctttccggtgggcgtgatcgcgggcaagcgcgagttcatggacgcg ctcgacggcggcgcctggcagtacggcgacgactccattcccggcgtgggcgtgacctac ttcgccggcaccttcgtgcgccacccgctggcgctggcggcggccaaggcctcgctcctg cacctgaaggaagccggccccgcgctgcaggccgggctcacgggcagcaccagcgccatg gccgcggagatgtcggcctggtgcaaggaggtcggcgcgccgatcgagatacgccacttc ggctcgctgtggcgcgtgagctggctcgaagaccacccgctgcaggacctgctgttcgcc atgatgcgcagccgcggcgtgcacattctggacaacttcccgtgcttcctcaccagcgcg cacagcgccgaggacatcgccttcatccagcgcgccttcagggaatcggtcgcggagatg caggaatcgggcttcctgccgcgccgcgccgcggtcgtgaccagcttcgacgtgcgcaag ccggccgaagaaggctcggtgctggcgcgcgacgtcgacggccagcccttctggtacgtg ccagaggcgcaggcatccacccaccacgtcaatggaaaggccgcagcatga

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