Variovorax sp. PMC12: C4F17_08080
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Entry
C4F17_08080 CDS
T05380
Name
(GenBank) LysR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AVQ80908
UniProt:
A0A2P1V6Z7
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All DBs
Position
1:complement(1730574..1731482)
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AA seq
302 aa
AA seq
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MDTLRAIEAFVHSVELGSLSGAARALDTTQPTVSKLVAGLERSLGVRLLRRTASGLSLTE
EGQRFHERSRRVLEDYGDAVADAREGIQQPRGLLRVSAPVTLGQRHLNAMVLEFLALYPD
IELELVLDDRFVDPLEERVDVSLRVGGKLPPDLVARHLGTWPRVLVASPDYIAARGKPRK
PQDLLTHDYLRYAGGDDGVLLQGPNGPEAVPVRSRYRVNNAVALLDSVLGGAGISLQPTW
MVADLLAQGRLVRVLGRHTGQAQELHLLYAPRRHLPLRVRVMVDFLAERVSRLPGALSPR
QG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacaccttgcgcgccatcgaagccttcgtgcacagcgtcgaactgggcagcctgtcg
ggcgccgcgcgtgcgctggacaccacgcagcccaccgtcagcaagctcgtcgcggggctc
gagcgctcgctcggcgtgcggctgttgcggcgcaccgcctcgggcctgagcctgacggag
gagggccagcgctttcacgagcgctcgcggcgcgtgctcgaagactacggcgacgcggtg
gccgatgcgcgcgaaggcatccagcaaccgcgcggcctgctgcgcgtgagcgcccctgtg
acgctgggccagcggcatctcaatgcgatggtgctggagtttctggcgctgtaccccgac
atcgagctggaactggtgctcgacgacagattcgtcgatccgctggaggaacgcgtcgac
gtgtcgctgcgggtcggcggcaagctgccgcccgatctcgttgcccggcatctcggcacc
tggccgcgcgtgctggtcgcctcgcccgactacatcgccgcgcgcggcaaaccgcgcaag
ccgcaggatctgctgacgcacgactacctgcgctatgcgggcggagacgacggcgtgctg
ctgcaggggccgaacgggccggaggcggtgccggtgcgcagccgctatcgcgtcaacaac
gccgtggcgctgctcgacagcgtgctcggcggcgcaggcatttcattgcagccgacgtgg
atggtggcggacctgctggcgcaaggccggctggtccgggtgcttggccggcacacaggg
caggcgcaggagcttcacctgctttatgcgccgcgccgccatctgccgctgcgggtgcgc
gtgatggtggatttcctggccgagcgggtgtcgcgcttgccaggagccctgtcgccccgg
caaggctga
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