KEGG   Variovorax sp. PMC12: C4F17_11730
Entry
C4F17_11730       CDS       T05380                                 
Name
(GenBank) amidase
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00970  Aminoacyl-tRNA biosynthesis
vam01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vam00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    C4F17_11730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:vam03029]
    C4F17_11730
Enzymes [BR:vam01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     C4F17_11730
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     C4F17_11730
Mitochondrial biogenesis [BR:vam03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    C4F17_11730
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-ProteinID: AVQ84578
UniProt: A0A2P1VHC0
LinkDB
Position
1:2532461..2533810
AA seq 449 aa
MTMNDDFTISALRARIARGELSHEALVGQVLEAAAQPAARHVFTRLYADGALAAARHADA
ARKAGVALGPLAGLPVSVKDLYDIAGETTMAGSAVCAGEPAAAHDAAAVARLRTQGAAIV
GKTNMTEFAFSGVGINPHHGTPHNPADAQTPRIPGGSSSGAAVSVALGLAVAGLGSDTGG
SIRIPAALCGIVGFKSTQSRVPRTGAFELARSLDTVCAMARSVEDCLTVDAAIADTPLAV
RRRPLQGMRLAVPRTLMFDDIEPAVAAAFDRALQTLSKAGAQMVDITLAELAEIATVNAP
GGFSPVEASAVHRERFAAKRDGFDTRVAARIALGTEVRAADYIAMQDRRRDWIGRVEHAI
EGFDALVCPTVPIVAPPIAALAEDAAFFKANGLLLRNTFAINLLDGCAFSLPCHAPGELP
VGLMLASVRGDDARLAAVALAVESALHAR
NT seq 1350 nt   +upstreamnt  +downstreamnt
ctgacgatgaacgacgacttcaccatttccgccctgcgcgcacgcatcgcgcgcggcgag
ctgtcgcatgaagcgctggtcgggcaagtgctcgaagcggcagcgcagcccgccgcgcgg
catgtgttcacgcggctctatgccgatggcgcactcgccgccgcgcgccatgccgatgcg
gcgcgcaaggccggcgtggcgctgggcccgctcgccggcctgcccgtgtcggtcaaggac
ctctacgacatcgcgggcgagaccaccatggccggctccgccgtgtgcgcgggcgagccc
gcggccgcgcacgacgcggccgccgtcgcgcggctgcgcacgcagggcgcggccatcgtc
ggcaagaccaacatgaccgagttcgcgttctccggcgtgggcatcaacccgcaccacggc
acgccgcacaacccggccgacgcgcagacgccgcgcatcccgggcggctcgtcctctggc
gcggcggtgtcggtggcgctgggcctcgctgtggccgggctgggctcggacacgggcggc
tccatccgcattcccgccgcgttgtgcggaatcgtcggcttcaagagcacgcagtcgcgc
gtgccgcgaacaggcgccttcgaactcgcgcgctcgctcgacaccgtctgcgccatggcc
cgcagcgtggaagactgcctgacggtggacgccgccattgccgacacgccgctcgcggtg
cgccgccgcccgctgcaaggcatgcgcctcgcggtgccgcgcacgctgatgttcgacgac
atcgagccggccgtggccgccgccttcgatcgcgccttgcagacgctgtcgaaggccggc
gcgcagatggtggacatcacgctggccgaactcgccgagatcgcgaccgtcaatgcgccc
ggcggcttctcgcccgtcgaggcctcggccgtgcaccgcgagcgcttcgccgcgaagcgc
gacggcttcgacacccgcgtggccgcgcgcattgcgctgggcaccgaggtgcgcgccgcc
gactacatcgccatgcaggaccgccggcgcgactggatcggccgcgtcgagcacgccatc
gaaggcttcgacgccctggtgtgcccgacggtgcccatcgtcgcgccgcccatcgccgcg
ctcgcggaagacgcggccttcttcaaggccaacggcctgctgctgcgcaacaccttcgcg
atcaacctgctggacggctgcgcattcagcctgccctgccatgcgccgggcgaactgccg
gtggggctgatgctggcctcggtgcgcggcgacgatgcaaggctggcggccgtggcgctg
gccgtggaatccgcgctgcacgcacgctga

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