Variovorax sp. PMC12: C4F17_11730
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Entry
C4F17_11730 CDS
T05380
Name
(GenBank) amidase
KO
K02433
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:
6.3.5.6
6.3.5.7
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00970
Aminoacyl-tRNA biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4F17_11730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vam03029
]
C4F17_11730
Enzymes [BR:
vam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
C4F17_11730
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
C4F17_11730
Mitochondrial biogenesis [BR:
vam03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
C4F17_11730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
AVQ84578
UniProt:
A0A2P1VHC0
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All DBs
Position
1:2532461..2533810
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AA seq
449 aa
AA seq
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MTMNDDFTISALRARIARGELSHEALVGQVLEAAAQPAARHVFTRLYADGALAAARHADA
ARKAGVALGPLAGLPVSVKDLYDIAGETTMAGSAVCAGEPAAAHDAAAVARLRTQGAAIV
GKTNMTEFAFSGVGINPHHGTPHNPADAQTPRIPGGSSSGAAVSVALGLAVAGLGSDTGG
SIRIPAALCGIVGFKSTQSRVPRTGAFELARSLDTVCAMARSVEDCLTVDAAIADTPLAV
RRRPLQGMRLAVPRTLMFDDIEPAVAAAFDRALQTLSKAGAQMVDITLAELAEIATVNAP
GGFSPVEASAVHRERFAAKRDGFDTRVAARIALGTEVRAADYIAMQDRRRDWIGRVEHAI
EGFDALVCPTVPIVAPPIAALAEDAAFFKANGLLLRNTFAINLLDGCAFSLPCHAPGELP
VGLMLASVRGDDARLAAVALAVESALHAR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ctgacgatgaacgacgacttcaccatttccgccctgcgcgcacgcatcgcgcgcggcgag
ctgtcgcatgaagcgctggtcgggcaagtgctcgaagcggcagcgcagcccgccgcgcgg
catgtgttcacgcggctctatgccgatggcgcactcgccgccgcgcgccatgccgatgcg
gcgcgcaaggccggcgtggcgctgggcccgctcgccggcctgcccgtgtcggtcaaggac
ctctacgacatcgcgggcgagaccaccatggccggctccgccgtgtgcgcgggcgagccc
gcggccgcgcacgacgcggccgccgtcgcgcggctgcgcacgcagggcgcggccatcgtc
ggcaagaccaacatgaccgagttcgcgttctccggcgtgggcatcaacccgcaccacggc
acgccgcacaacccggccgacgcgcagacgccgcgcatcccgggcggctcgtcctctggc
gcggcggtgtcggtggcgctgggcctcgctgtggccgggctgggctcggacacgggcggc
tccatccgcattcccgccgcgttgtgcggaatcgtcggcttcaagagcacgcagtcgcgc
gtgccgcgaacaggcgccttcgaactcgcgcgctcgctcgacaccgtctgcgccatggcc
cgcagcgtggaagactgcctgacggtggacgccgccattgccgacacgccgctcgcggtg
cgccgccgcccgctgcaaggcatgcgcctcgcggtgccgcgcacgctgatgttcgacgac
atcgagccggccgtggccgccgccttcgatcgcgccttgcagacgctgtcgaaggccggc
gcgcagatggtggacatcacgctggccgaactcgccgagatcgcgaccgtcaatgcgccc
ggcggcttctcgcccgtcgaggcctcggccgtgcaccgcgagcgcttcgccgcgaagcgc
gacggcttcgacacccgcgtggccgcgcgcattgcgctgggcaccgaggtgcgcgccgcc
gactacatcgccatgcaggaccgccggcgcgactggatcggccgcgtcgagcacgccatc
gaaggcttcgacgccctggtgtgcccgacggtgcccatcgtcgcgccgcccatcgccgcg
ctcgcggaagacgcggccttcttcaaggccaacggcctgctgctgcgcaacaccttcgcg
atcaacctgctggacggctgcgcattcagcctgccctgccatgcgccgggcgaactgccg
gtggggctgatgctggcctcggtgcgcggcgacgatgcaaggctggcggccgtggcgctg
gccgtggaatccgcgctgcacgcacgctga
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