Variovorax sp. PMC12: C4F17_13020
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Entry
C4F17_13020 CDS
T05380
Symbol
dppD
Name
(GenBank) dipeptide ABC transporter ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_13020 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_13020 (dppD)
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C4F17_13020 (dppD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
Mg_chelatase
AAA_7
AAA_29
AAA_16
CbiA
Motif
Other DBs
NCBI-ProteinID:
AVQ81802
UniProt:
A0A2P1V9E7
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All DBs
Position
1:complement(2776924..2777964)
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AA seq
346 aa
AA seq
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MTTNANNTPRLAVSNLSTSFPTEDGLVRSVADVSFSIQPGKTTALVGESGSGKSVTSLTL
MRLLPKTANAQVSGSASFVTREGKTLDLLRIGEREMRSLRGNQLSMIFQEPMTSLNPVFT
IGEQIAESVRLHKGLDRKAALAHALRMLELVEIPAAAQRIHEYPHQLSGGMRQRVMIALA
MACDPTLLIADEPTTALDVTIQAQILELMRRLQAETGMSILFITHNLGVVAHHADDVVVL
YAGRVVESAPVRPLFAQPEHPYTQGLLACLPGKARLPGQPKPKRLFAIRGQVSSPLAPPP
GCAFEPRCDLALPACSAAMPPLIETHHGREARCVRVQPAQPLARVA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaacgccaacaacaccccacgcctcgcggtcagcaacctgagcaccagcttc
ccgaccgaagacggcctcgtgcgttcggtggccgacgtgagcttttccatccagcccggc
aagacgaccgcgctggtcggcgaatcgggctcgggcaagtcggtcaccagcctcacgctg
atgcgcctgctgcccaagacggcgaacgcgcaggtcagcggcagcgcttccttcgtgacg
cgcgaaggcaagacgctcgacctgctgcgcatcggcgaacgcgagatgcgctcgctgcgc
ggcaaccagctgtcgatgatcttccaggagccgatgaccagcctgaacccggtgttcacc
atcggcgagcagattgcggagagcgtgcgcctgcacaaggggctggaccgcaaggcggcg
ctggcccatgcgctgcgcatgctggagctggtcgagataccggccgcggcgcagcgcatc
cacgaatatccgcaccagctctcgggcggcatgcggcagcgcgtgatgatcgcgctggcc
atggcctgcgacccgacgctgctgatcgccgacgagcccaccaccgcgctcgacgtgacc
atccaggcgcagatcctggagctcatgcgccggctgcaggccgagacgggcatgagcatc
cttttcatcacgcacaacctcggcgtggtcgcgcaccatgccgacgacgtggtggtgctg
tatgcggggcgcgtggtcgaaagcgctccggtacggccgctgttcgcgcagcccgagcat
ccctacacgcagggcctgctggcctgcctgccgggcaaggcgcggttgccggggcagccc
aagcccaagcggctgttcgcgatccgcggccaggtgtcgagcccgctggcgccgccgccg
ggatgcgccttcgagccgcgctgcgacctggcgctgcccgcgtgcagcgcggcaatgccg
ccgctgatcgagacccatcatgggcgcgaggcgcgctgcgtgcgggtgcagccggcgcaa
cctttggcgagggttgcatga
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