Variovorax sp. PMC12: C4F17_15710
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Entry
C4F17_15710 CDS
T05380
Name
(GenBank) flagellar motor protein MotB
Organism
vam
Variovorax sp. PMC12
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
Porin_7
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
AVQ82284
UniProt:
A0A2P1VAU3
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Position
1:complement(3374324..3378556)
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AA seq
1410 aa
AA seq
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MKRKLPKRIALAGAVTAACMGMGLAAAQESAVRGRMHDQAAADPRAVDIDGTRHLPRSSE
RELPKATFVLGDASAPAAAAGPTPPPVPGAERSDTGVPHFESGADGLAPADRAQLDRIAA
QVKGRDGLRFEIVGHTDTQALSARSRERFADNHALGLARAQQVARYLTQRLGLPEDAAAA
SSRGPDAPVATPATDPANWAANRRVEVRVYWRDAPVAVAPAPAAADRGVCRTFTAFGTDD
APLRLSVDGQLLTADGKAAAGDGTNSADRQRCVDVQLERNQLRLQYDNLSQPRRLSASAW
PTTVVAGDTVRFAGYSNYLLFTSKAELRVFTANEAMQRRLVATVPLDAALRGEWQVPEGL
LNRVAEGASGKLYYRVRVYDRQGRFDETDDLSLTLAQRHRPETGTPPDPARELLRGYGMN
NIAIANIPLSAGTVTASGAAIRPGETVRALGFAVPVDESGRFVFQQLVPRRVQTGEIAVT
DAQGATRAYRRDFELPASDWFFVGQADLTVGSNSVSGPAAIMTNDKNRYGGGGWSEGRIA
GYAKGQLNDRWTLTASVDTEERPLKELFRNLDRKDPTSLFRRFDPEDSWTTFGDDSTAIQ
DAPTQGRFYLRVDDGRSQAMWGNFKLNFGDTELTRVSRGLYGFHGRYLGEESTSFGEARL
KIDAFAAEPGTLAAREEFRGTGGSLYYLRNQDITRGAERVTLEIRDKDSGFVLKRTQLVP
SSDYEIDYLQGRVLLSAPLPSLSDDGSLVRAGGFTGMPTYLVVDYEYTPLTTSLDTLAVG
GRVSWWANDHVGVGVTASRQDQIGGDQRLAGADLTLRKTENTYFKGEFARSKGPGTGQLD
SMDGGFSFTGRNGAVGNTLGNGPTGSASAWRLEGQADLGDFDIRGGGRVSAYAQSRDAGF
SAPGQYASNATRQFGVQATVPFGEKAENGELRLKADRRDERDGYNSSVFDAQYSLALTPE
WKLGLGLRYDEKTGDALITSPSLPTTQAVSGERADAAVQLEYTGSDRWSAYGFTQKTLRR
TGTRLENDRLGFGGRYRVNDKLALRGELSTGDGGFAGKAGVDYQYDDRSNLYMTYVSDTG
RTDENLIGRGGTLVTGVRSRVGDGLTMFTEHRQATGTQPGLTHAYGVQYAPDTRWTFGVN
FENGWVGAETLGATRREAVAFTTGYSSERLKYSGGLEYRKDRTTSETRTSWLLKNSFTWK
VDDDSRWLGKFNWADSDSSTGVLAAAKYTEAMLGYALRPAFNDRLNLLFKYTFLYDLSSP
GQVVSSGVDSSLGTVSTTAVDYQQRSHVFAIDATWDLNERWTLGGKYAWRRGDLRASRDS
SAPWFKSSAELAVLRVDWKLVRNWDWMVEWRSLRARELQDRKNGWVTAAYYHVNENLKVG
VGYNFTDYSDNLTDMSYRSKGWFLNVLGKF
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaagctacccaagcgcatcgccctcgcaggcgccgtcaccgccgcctgcatg
ggcatggggctcgcggccgcgcaggagtcggccgtgcgcggccgcatgcacgaccaggcc
gcggccgacccgcgcgccgtggacatagacggcacccgccacctgccgcgcagcagcgag
cgcgaactgcccaaggccaccttcgtgctgggcgacgcgagcgcgccggcagctgccgcg
ggcccgacgccgccgcccgtgccgggcgccgagcgcagcgacaccggagtgccgcatttc
gaatcgggcgccgacgggctcgcgccggccgaccgcgcgcagctcgaccgcatcgccgcg
caggtgaaagggcgcgacggcctgcgcttcgagatcgtcggccacaccgacacccaggcg
ctgagcgcgaggtcgcgcgaacgcttcgccgacaaccatgcgctggggctggcgcgcgcg
cagcaggtggcgcgctacctcacgcagcgcctgggcctgcccgaagacgcggcggccgct
tcctcgcgcggacccgacgcgcccgtggccacgcccgccaccgaccccgccaactgggcc
gccaaccgccgcgtcgaagtgcgcgtgtactggcgcgatgcgccagtggccgtggcaccc
gcgccggcggcggccgaccgcggcgtgtgccgcaccttcaccgccttcggcaccgacgac
gcgccgctgcgcctgagcgtggacggccagctgctcacggccgacggcaaggccgcggcc
ggcgacggcaccaacagcgccgaccgccagcgctgcgtcgacgtgcagctcgagcgcaac
cagctgcgcctgcagtacgacaacctttcccagccgcgccgcctgagcgccagcgcctgg
cccaccaccgtggtggccggcgacaccgtgcgcttcgccggctacagcaactacctgctg
ttcaccagcaaggccgagctgcgcgtgttcaccgccaacgaggcgatgcagcgccgcctg
gtcgcgaccgtgccgctggacgccgcgttgcgcggcgaatggcaggtgcccgagggcttg
ctgaaccgcgtcgccgaaggagcgagcggcaagctgtactaccgcgtgcgcgtgtacgac
cgccagggccgcttcgacgagaccgacgatctctcgctcacgctggcccagcgccacagg
cccgagaccggcacgccgcccgacccggcgcgcgaactgctgcgcggctacggcatgaac
aacatcgccatcgccaacattccgctgagcgcaggcacggtcaccgccagcggcgcggcc
atccgccccggcgagacggtgcgcgcgctgggcttcgcggtgccggtggacgagagcggg
cgcttcgtgttccagcagctggtgccgcgccgcgtgcagaccggcgagatcgcggtcacc
gacgcgcagggcgccacgcgcgcctaccgccgcgacttcgagctgcccgcgagcgactgg
ttcttcgtcgggcaggccgacctcacggtgggcagcaacagcgtgagcggcccggccgcg
atcatgaccaacgacaagaaccgctacggtggcggcggctggagcgaaggccgcatcgcc
ggctatgccaagggtcagctcaacgaccgctggacgctgacggccagcgtcgacaccgag
gaacgcccgctcaaggaactgttccgcaatctcgaccgcaaggacccgacctcgctgttc
cgccgcttcgacccggaggactcgtggaccaccttcggcgacgactccaccgccatccag
gacgcgcccacgcagggccgcttctacctgcgcgtggacgacggccgctcgcaggcgatg
tggggcaacttcaagctcaacttcggcgacaccgaactcacccgcgtgagccgcggcctc
tacggcttccatggccgctacctgggcgaggagtcgacctcgttcggcgaggcgcggctg
aagatcgacgccttcgcggctgagcccggcacgctggccgcgcgagaggaattccgcggc
accggcggctcgctctactacctgcgcaaccaggacatcacgcgcggcgccgagcgcgtg
acgctggaaatccgcgacaaggattccggcttcgtgctcaagcgcacgcagctcgtgccg
agctccgactacgagatcgactacctgcagggccgcgtgctgctgtcggcgccgctgccc
agcctgtccgacgacggctcgctggtgcgcgccggcggcttcaccggcatgccgacctac
ctggtggtggactacgaatacacgccgctcaccacctcgctcgacacgctcgccgtgggc
ggccgtgtctcctggtgggccaacgaccacgtgggcgtgggcgtgaccgcgtcgcgccag
gaccagatcggcggcgaccagcgcctggccggcgccgacctgacgctgcgcaagaccgag
aacacctacttcaagggcgagttcgcgcgcagcaagggcccgggcaccggccagctcgac
tcgatggacggcggcttcagcttcaccgggcgcaacggcgcggtcggcaacacgctgggc
aacggccccaccggcagcgccagcgcctggcgcctggaaggccaggccgacctgggcgac
ttcgacatccgcggcggcgggcgcgtgagcgcctatgcgcagtcgcgcgacgccggcttc
tccgcgccgggccagtacgcgagcaacgccacgcgccagttcggcgtgcaggccaccgtg
cccttcggcgagaaggccgagaacggcgagctgcgcctgaaggccgaccgccgcgacgag
cgcgacggctacaacagcagcgtgttcgacgcgcagtattcgctggccctgacgcccgag
tggaagctgggcctgggcctgcgctacgacgaaaagaccggcgacgcactcatcaccagc
ccttcgctgccgaccacgcaggcggtgtccggcgagcgcgccgacgccgccgtgcagctc
gaatacaccggcagcgaccgctggagcgcctacggcttcacgcagaagacgctgcggcgc
accggcacgcggctggagaacgaccgcctgggcttcggcgggcgctaccgcgtcaacgac
aagctggcgctgcgcggcgagctctccaccggcgacggcggcttcgcgggcaaggccggc
gtcgactaccagtacgacgaccgctccaacctctacatgacctacgtgtccgacaccggc
cgcaccgacgagaacctcatcggccgcggcggcaccctggtgacgggcgtgcgctcgcgc
gtgggcgacggcctcacgatgttcaccgagcaccgccaggccaccggcacgcagccgggc
ctcacgcatgcctacggcgtgcagtacgcgcccgacacgcgctggaccttcggcgtgaac
ttcgagaacggctgggtcggcgccgagacgctgggcgccacgcgccgcgaggccgtcgcc
ttcaccaccggctactcgagcgagcgcctgaagtacagcggcggcctggagtaccgcaag
gaccgcacgacttccgagacccgcaccagctggctgctgaagaactcattcacctggaag
gtggacgacgactcgcgctggctcggcaagttcaactgggccgacagcgacagcagcacc
ggcgtgctggccgcggccaagtacacggaggccatgctcggctacgcgctgcgccccgcg
ttcaacgaccggctgaacctgctgttcaagtacaccttcctgtacgacctgtcgtcgccg
gggcaggtggtgtcgagcggcgtcgattcgagcctgggcacggtgtcgaccaccgccgtc
gactaccagcagcgcagccacgtgttcgccatcgacgccacctgggacctcaacgagcgc
tggacgctgggcggcaagtacgcctggcggcgcggcgacctgcgcgcgagccgcgacagc
tcggcgccgtggttcaagagctcggccgaactcgcggtgctgcgcgtcgactggaagctg
gtgcgcaactgggactggatggtcgagtggcgctcgctgcgcgccagggaactgcaggac
cgcaagaacggctgggtcacggcggcgtactaccacgtcaacgagaacctgaaggtgggc
gtgggctacaacttcaccgactactcggacaacctcaccgacatgagctaccgcagcaag
ggctggttcctgaacgtgctcggcaagttctga
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