Variovorax sp. PMC12: C4F17_17535
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Entry
C4F17_17535 CDS
T05380
Name
(GenBank) recombination-associated protein RdgC
KO
K03554
recombination associated protein RdgC
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vam03400
]
C4F17_17535
DNA repair and recombination proteins [BR:
vam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C4F17_17535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
AVQ82612
UniProt:
A0A2P1VBR9
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All DBs
Position
1:3793325..3794341
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AA seq
338 aa
AA seq
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MSVFKNVIVYRIEPAWSQTLAEAEEGLGKQRFVPCGPSQEKSAGWVEPRGEANGPLVESI
DGQWLVEYMIESKQVPGSVVRRKLDERCAHIEATTGRKPGKKEKKELKEDITLELLPMAF
TRSARVTVWIDKAENRLVINSGNASRADEVVTSLVKSLDGFAVALINTQIEPAAAMANWL
LTQEPPAGFTIDRECELKASDDSKAVVRYAKHPLDIDEVKQHITDGKRPTRLALTWDDRV
SFELTHGLLIRKITFLEGTGDGAAGGKKEDNFDADVAIATGELGQLVPALLDALGGEAAF
SAAPPDDTVKPATAPAAAPATTAPADAADSAEEEDAPF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtattcaagaacgtcatcgtctatcgcatcgaacctgcctggtcccaaacactg
gccgaggcggaagaagggctaggaaagcagcgcttcgtgccctgcggcccctcgcaggaa
aagtccgccggctgggtcgagccccgcggcgaggccaacggcccgctggtcgaatccatc
gacggccagtggctggtcgaatacatgatcgagagcaagcaggtgcccggctccgtggtg
cgccgcaagctcgacgagcgctgcgcccacatcgaggccaccaccggccgcaagcccggc
aagaaggaaaagaaagagctgaaggaagacatcacgctcgagctgctgccgatggccttc
acccgcagcgcgcgcgtgacggtgtggatcgacaaggcggagaaccgcctggtcatcaac
agcggcaatgcatcgcgcgccgacgaggtcgtcaccagcctcgtgaagtcgctcgacggc
ttcgcggtggccctcatcaacacgcagatcgagccggctgcggccatggccaactggctg
ctgacgcaggagccgccggccggcttcaccatcgaccgcgagtgcgagctcaaggcctcc
gacgactccaaggccgtggtgcgctacgccaagcatccgctggacatcgacgaagtcaag
cagcacatcaccgacggcaagcgccccacgcggctcgcgctgacctgggacgaccgcgtg
tcctttgagctcacgcacgggctgctgatccgcaagatcaccttcctcgaaggcacgggc
gacggcgccgccggcggcaagaaggaagacaacttcgacgccgacgtggccatcgccacg
ggcgagctgggccagctggtgccggcgctgctcgatgcgctgggcggcgaggccgcgttc
tcggccgcgccgccggacgacacggtgaagcctgcaaccgcgcctgcagcagcgcccgcc
acgacggcaccggcagacgcagcagactccgcagaggaagaagacgcgcccttctga
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