KEGG   Variovorax sp. PMC12: C4F17_17835
Entry
C4F17_17835       CDS       T05380                                 
Symbol
vasA
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_17835 (vasA)
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_17835 (vasA)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AVQ82671
UniProt: A0A2P1VBY6
LinkDB
Position
1:complement(3860953..3862824)
AA seq 623 aa
MDARLLDYYNRELTYMHELGAEFAQRYPKIAGRLGMRGIEVSDPYVERLLEGFSFLTARI
QLKMDAEFPRFSQRLLEVVYPNFLAPLPAMAVVQIDGNLNEGSLKAGYELPRHTILRGRM
IKGEQTACEFRTGHAVTLWPVRVAEAGIGPVPAEIAHAMPAVARQAKSALTIRLEAVGGA
RFSEMPLERLEFFLSGAELHALRVLELVAHHAVGTVCRSGPGSTARIVPLGDDAIRHEGF
APDQALLPYDARSFQGYRLLHEYFAFPDRYLFFSVNKLRAAAQAMGGNTMEIVILLDRAD
ADLERLVDARHFSLFCTPIINLVPRRSDRIPVGPGQHEHHAVIDRTRPRDFEIFTVERVT
GHMANGSEEREFRPFLGSFAADDGDFGAYFSLRREPRLVSDRARAQGTRTSYTGSEVYVS
LVDQHDAPFPHSLRHITLDALCTNRDLPLLLPTGLESDFTLRVSAPVRSIRILRGPSRPY
PALAEGALTWRLISHLGLNYLSLTDVDATQGAAALREMLDLYGNLADPAVRRQIQGVRSM
ALAPVFRRLPEPGPIVFGRGVEIALKIDEVAFSGASPYLFGAVLEQFFSRHVSLNAFTEF
ALSSLQRGEIARWTPRIGRRPAV
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggatgcgcggctgctggattactacaaccgcgagctcacctacatgcacgagctcggg
gccgagttcgcgcagcgctatcccaagatcgcgggccgcctgggcatgcgcggcatcgag
gtcagcgatccgtacgtcgagcgcctgctcgaaggcttcagctttctcaccgcgcgcatc
cagctcaagatggacgcggaatttccgcgcttctcgcagcggctgctggaggtggtgtac
cccaacttcctcgcgccgctgcccgcgatggccgtggtgcagatcgacggcaacctcaac
gaaggctcgctgaaggccggctacgagctgccgcgccacaccatcctgcgcgggcgcatg
atcaagggcgagcagacggcttgcgagttccgcaccggccacgccgtcacgctgtggccc
gtgcgcgtggccgaggccggcatcggcccggtgccggcggaaatcgctcatgccatgccg
gcggttgcgcgccaggcgaagagcgcgctcaccatccggctcgaagcggtgggcggcgcg
cgcttctccgagatgccgctggagcggctcgagttcttcctgtcgggcgccgagctgcat
gcgctgcgcgtgctcgaactcgtggcgcaccatgccgtgggcaccgtatgccgcagcggc
ccgggcagcaccgcgcgcatcgtgccgctcggcgacgatgccatccgccacgaaggcttc
gcgcccgaccaggcgctgctgccctacgacgcgcgctcgttccagggctaccgcctgctg
cacgagtacttcgccttccccgaccgctacctgttcttcagcgtcaacaagctgcgcgcg
gcggcacaggccatgggcggcaacacgatggaaatcgtgatcctgctcgaccgcgccgat
gccgacctcgagcggctggtcgatgccaggcacttctcgctgttctgcacgccgatcatc
aacctcgtgccgcgccgcagcgaccgcattccggtcgggcctggccagcacgagcaccat
gcggtcatcgaccgcacgcggccgcgcgacttcgagatcttcaccgtcgagcgcgtgacc
ggccacatggccaacggatcggaagagcgcgagttccggcccttcctgggttcgttcgcg
gcggacgacggcgacttcggcgcctacttctcgctgcgccgcgagccgcgcctggtgtcg
gaccgcgcccgcgcacagggcacgcgcaccagctacaccggcagcgaggtgtacgtgtcg
ctggtcgaccagcatgacgcgccgttcccgcacagcctgcgccacatcacgctcgacgcg
ctgtgcaccaaccgcgacctgccgctgctgctgccgaccgggctggagtccgatttcacg
ctgcgcgtgtcggcgccggtgcgctcgatacgcatcctgcgcgggccgtcgcgaccctat
ccggcgttggccgagggcgcgctcacctggcggctcatcagccatctcggcctcaactac
ctgagcctgaccgacgtcgacgcgacgcagggtgcagccgcgctgcgcgagatgctcgac
ctttatggcaacctggccgatccggccgtgcgccggcagatccagggcgtgcgttcgatg
gcgctggcgccggtcttccgccgcctgcccgaaccggggccgatcgtgttcgggcgcggc
gtggagatcgcgctgaagatcgacgaggtcgcgttctccggcgcgagcccgtacctgttc
ggcgcggtgctggagcagttcttcagccgccacgtgtcgctcaatgcattcaccgagttc
gcgctgtccagcctgcagcgcggagaaatcgcgcgctggaccccgcgcatcggacgccgc
cccgccgtatga

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