Variovorax sp. PMC12: C4F17_19280
Help
Entry
C4F17_19280 CDS
T05380
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00550
Peptidoglycan biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4F17_19280 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vam01003
]
C4F17_19280 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
C4F17_19280 (pbpC)
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
C4F17_19280 (pbpC)
Glycosyltransferases [BR:
vam01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C4F17_19280 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
C4F17_19280 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
AVQ84699
UniProt:
A0A2P1VHP8
LinkDB
All DBs
Position
1:4174881..4177163
Genome browser
AA seq
760 aa
AA seq
DB search
MWALALVLVLALLRLWPHAALSETVGSSRAVYAQGGELLRLTLAGDEQYRLWVPLDRISP
TLVDAVLLYEDRRFHAHPGVNPAALARSAWRIASGERRQGGSTLTMQLARRVYGIDSRTP
TGKVAQIFAALWLEARFSKHDILEAYLNTAPYGGNIEGVQAASLIYFRKDAAKLSLPEAL
TLAVIPQNPVKRIAERGRNAELQSARERLWALWAERDPAAKQHAPDAQLALSAQSRGSLP
FLAPHATDMLLAQERGVQEVRTTIDLRMQATLERVMGQYLRTHADVGMTNASALLLDAST
MQVRAMIGSADFRNDAIAGQVNGVLAKRSPGSTLKPFIYALALDQGLLHPKTMLKDAPTS
FGPYTPENFDHRFAGPLPAQEALIRSRNVPAVAVAARLSKPGLYDFMRLAGVQKLQSESH
YGLALVLGGGEVTPEELAGMYATLANGGISQPIRYTQPAPDERPVQPLRLLSEEASFITL
DMLRHTPRPDTTLPARPAIAWKTGTSWGFRDAWTAGVFGRHVLVVWVGNFDGTSNPALVG
VDAAAPLFLRMVDALRAQRLDPGEVASRQPPDLRQVEVCAATGGLPDALCPVRTMTWFIA
GKSPIQVSNLHRAVWVDETTGKVVCGPQPNARQQVVEQWGSDMRRLFRQAGLPRASAPAD
GCEKDGGAPESAPLITSPLRGVRHTLRANKPEPLVLRAEAAAGTQAIYWFADDALIGRAA
PGEGITWMPDLAASGRRYVLRAVDDQGRAESREVTVDIAP
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ctgtgggcgctggcgcttgtcctcgtgctcgcgctgctgcgcctgtggccgcacgcggcg
ttgagcgagaccgtcggcagttcgcgcgctgtgtatgcgcagggcggggagctgctgcgg
ctcacgctcgcgggggacgagcagtaccggctctgggtgccgctcgatcgcatctcgccc
acgctggtcgacgcggtgctgctgtacgaagaccggcgcttccatgcgcaccccggcgtc
aaccccgccgcgctggcgcgcagtgcgtggcgcattgccagcggcgaacgcaggcagggc
ggctcgacgctcacgatgcagctcgcgcgccgcgtctacggcatcgacagccgcacgccc
acaggcaaggtcgcgcagatcttcgcggcgctgtggctggaggcgcgcttcagcaagcac
gacatcctggaggcgtacctcaacaccgcgccctatggcggcaacatcgaaggcgtgcag
gccgcgagcctcatctacttccgcaaggacgccgccaagctgagcctgcccgaggcgctg
acgcttgccgtgattccgcagaaccccgtcaagcgcatcgccgagcgcgggcgcaatgcc
gagctgcagtcggcgcgcgaacggctgtgggcgctgtgggccgagcgcgacccggccgcg
aagcagcatgcgcccgatgcgcagctcgcgctgtcggcgcagtcgcgcggcagcctgcct
tttcttgcgccgcacgccaccgacatgctgctcgcgcaggagcgtggcgtgcaggaggtg
cgcaccaccatcgacctgcgcatgcaggccacgctcgaacgcgtgatgggccagtacctg
cgcacgcatgccgacgtgggcatgacgaacgcgagcgcgttgctgctcgacgcctcgacc
atgcaggtgcgcgcgatgatcggctcggccgacttccgcaacgacgccatcgcggggcag
gtcaacggcgtgctggccaagcgctcgccgggctccacgctcaagcccttcatctacgcg
ctggcgctcgaccaggggctgctgcatccgaagacgatgctgaaggacgcgccgacctcc
ttcggcccctacacgcctgagaacttcgaccaccgcttcgccggcccgctgccggcgcag
gaggcgctgatccgcagccgcaacgtgcccgcggtcgccgtggcggccaggctctcgaag
ccggggctgtatgacttcatgcggctcgcgggcgtgcagaagctgcagagcgaatcgcac
tacggcctcgcgctggtgctgggcggtggcgaggtcacgcccgaggaactggcgggcatg
tacgcgacgctggccaacggcggcatctcgcagcccattcgctacacgcagcccgcgccc
gacgagcggcccgtgcagccgctgcgcctgctgagcgaggaggcttccttcatcacgctc
gacatgctgcgccacacgccgcgccccgacaccacgctgcccgcgcgccccgccatcgca
tggaagacgggcacgtcctggggctttcgcgatgcgtggacggccggcgtgttcggccgg
catgtgctggtggtgtgggtgggcaacttcgacggcaccagcaaccccgcgctggtgggc
gtcgatgcggccgcgccgctgttcctgcgcatggtcgatgcgctgcgcgcccagcggctc
gaccccggcgaggtcgcgtcgcgccagccgcccgacttgcgccaggtcgaagtctgcgcg
gcgacgggtggcctgcccgacgcgctgtgcccggtgcgcaccatgacgtggttcatcgcc
ggcaagtcgcccatccaggtcagcaacctgcaccgcgcggtatgggtcgacgagacgacc
ggcaaggtggtctgcggcccgcagcccaatgcccgccagcaggtggtggagcaatgggga
agcgacatgcgccgactgttccgccaggccggcctgccgcgcgcgagcgcaccggccgat
ggctgcgagaaagacggcggcgcaccggaaagcgcaccgctcatcacctcgcccctgcgc
ggcgtgcgccacacgctgcgcgcgaacaagcccgaaccgctggtgctgcgcgccgaagcc
gcggcgggcacgcaggcgatctactggtttgccgacgacgcgctcatcggccgcgccgcg
cccggcgaaggcatcacgtggatgcccgacctcgcggcctcgggccggcgctacgtgctg
cgcgcggtcgacgaccaggggcgtgccgagtcgcgcgaggtgacggtcgacatcgcacct
tga
DBGET
integrated database retrieval system
