Variovorax sp. PMC12: C4F17_20530
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Entry
C4F17_20530 CDS
T05380
Name
(GenBank) LysR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_20
HTH_AsnC-type
HTH_24
HTH_30
HTH_28
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AVQ83160
UniProt:
A0A2P1VDA5
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Position
1:complement(4426217..4427155)
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AA seq
312 aa
AA seq
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MEPLNHLESFVQSAEGGSFSAAARRLGLTPAAVSKNVARLEARLGLRLFQRSTRSLTLTE
GGERFLAQIGGALATLREAVAGIDTDDGQPAGTLKVSMGQAFGRAHVLPMLGDFIARYPA
IVPDWHFDNQQVDLVGEGFDAAIGGGIELSAGLVARELARVHQVAVASPRYMEGRDMPRQ
PSDLAALDALLRRSSPTGRVRGWTLRHVRANAREAEITVELPRPRAVFNDPEALAQAALM
GLGVAMLPMPFVERSLRGGELVRLLPEWYQDTGAVWLYYPSKKLLPPKTRVFVDFVLERF
RSERFAQRMQVA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgctcaatcacctcgaatccttcgtgcagagcgcggagggcggcagcttctcg
gccgcggcccggcgcctgggcctcacgccggcggcggtcagcaagaacgtggcgcggctc
gaggcgcggctgggcctgcggctgttccagcgcagcacgcgcagcctcacgctgaccgag
ggcggcgagcgcttcctcgcgcagatcggcggcgcgctcgccacgctgcgcgaggccgtg
gccggcatcgacaccgacgacggccagcccgccggcacgctcaaggtgagcatgggccag
gctttcgggcgcgcgcatgtgctgccgatgctgggcgacttcatcgcgcgctacccggcc
atcgtgccggactggcatttcgacaaccagcaggtcgacttggtcggcgagggcttcgac
gcggccatcggcggaggcatcgaactgtcggcggggctggtggcgcgcgaactggcgcgc
gtccaccaggtggcggtggcgtcgccgcgctacatggaaggacgcgacatgccccggcag
ccgtcggacctggcggcgctcgacgccttgctgcgccgctcgtcgcccacgggccgcgtg
cgcggctggacgctgcggcacgtgcgcgccaacgcccgcgaggccgagatcacggtcgaa
ctgccccgcccgcgcgccgtcttcaacgaccccgaagccctggcgcaggccgcgctcatg
gggctgggcgtggcgatgctgccgatgcccttcgtcgagcgcagcctgcgcggcggcgag
ctggtgcggctgctgcccgagtggtaccaggacacgggcgcggtgtggctctactacccg
agcaagaagctgctgccgccgaagacgcgggtgttcgtcgacttcgtgctcgagcgcttt
cgcagcgaacgcttcgcccagcgcatgcaggtggcctga
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