Variovorax sp. PMC12: C4F17_22050 Help Entry C4F17_22050       CDS       T05380                                  Name (GenBank) AMP-dependent synthetase   KO K01897   long-chain acyl-CoA synthetase [EC:6.2.1.3] Organism vam  Variovorax sp. PMC12 Pathway vam00061   Fatty acid biosynthesis vam00071   Fatty acid degradation vam01100   Metabolic pathways vam01212   Fatty acid metabolism vam02024   Quorum sensing Module vam_M00086   beta-Oxidation, acyl-CoA synthesis Brite KEGG Orthology (KO) [BR:vam00001]  09100 Metabolism   09103 Lipid metabolism    00061 Fatty acid biosynthesis     C4F17_22050    00071 Fatty acid degradation     C4F17_22050  09140 Cellular Processes   09145 Cellular community - prokaryotes    02024 Quorum sensing     C4F17_22050  09180 Brite Hierarchies   09181 Protein families: metabolism    01004 Lipid biosynthesis proteins [BR:vam01004]     C4F17_22050   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vam04147]     C4F17_22050 Enzymes [BR:vam01000]  6. Ligases   6.2  Forming carbon-sulfur bonds    6.2.1  Acid-thiol ligases     6.2.1.3  long-chain-fatty-acid---CoA ligase      C4F17_22050 Lipid biosynthesis proteins [BR:vam01004]  Acyl-CoA synthetase   Long/very long chain acyl-CoA synthetase    C4F17_22050 Exosome [BR:vam04147]  Exosomal proteins   Exosomal proteins of breast milk    C4F17_22050   Exosomal proteins of breast cancer cells    C4F17_22050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding AMP-binding_C MFS_MOT1 Motif Other DBs NCBI-ProteinID:  AVQ83424 UniProt:  A0A2P1VE44 LinkDB All DBs Position 1:4728886..4730499 Genome browser AA seq 537 aa AA seqDB search METLPDRPQQPLHEYLRTHARERGASPACIWYGHAMSWAELDRASDAFAARLQALGVKKG EPVVLFLNNCPQYLVAHFGIQKIGAIVCPSGPLNKEHELAYQVNDLKARVIIAAAPLLPV VRKVQPESALEHVFAVHYADLLPAQPSLDLPAELAAEHDAARTVPEGCEDFLAVMKADAR PQPVAIDMDDVALMTYTSGTTGLPKGAMLTYANALFKTRAAADCNGVGPADVLLSIAPLY HIAGMLMGVNVPVLSGAASVLLHRFDPRTVLQAISTYKVSWWYSIAPMNVACMQVPDIAA FDLGSLKMNPVTSFGITFTEPLAQQWRSHAPNCTSFEAAYGLSETHTCDTYTPHHAPRWG TQGIAVPGVTIRIIDTDTQADMPVGEVGEIVLTSKGSFKGYWNKPEATAATLRNGWVHTG DMGKLDADGYLTFIGRFKEMIKVSGYSVFPEEVETILIKHPAVAQAAVIAQPDAEKGEVV KAFIVRKPGAALEADALVAWARDNMASYKAPRAVSFIDALPTTGAGKVLRRLLKDKS NT seq 1614 nt NT seq  +upstreamnt  +downstreamnt atggagacattgcccgaccgcccccagcagcccctgcacgagtacctgcgcacccacgcg cgcgagcgcggcgcgagccccgcgtgcatctggtacggccatgccatgagctgggccgag ctcgaccgcgcgagcgatgccttcgcagcgcggctgcaggccctgggcgtgaagaagggc gagccggtggtgctgttcctcaacaactgcccgcagtacctggtggcgcacttcggcatc cagaagatcggcgccatcgtctgcccgagcggcccgctcaacaaggagcacgagctggcc taccaggtcaacgacctgaaggcgcgggtgatcatcgcggccgcgccgttgctgccggtg gtgcgcaaggtgcagcctgaaagcgcgctcgaacatgtgttcgcggtgcactacgccgac ctgctgcccgcgcagccctcgctcgacctgccggccgaactggccgccgagcacgacgca gcgcgcaccgtgcccgagggctgcgaagacttcctcgccgtgatgaaagccgatgccagg ccgcagcccgtggccatcgacatggacgacgtggcgctcatgacctacacctcgggcacc acgggcctgccgaagggcgcgatgctcacttacgccaacgcgctcttcaagacgcgcgcg gcggccgactgcaacggcgtggggccggccgacgtgctgctgtccatcgcgccgctgtat cacatcgccggcatgctgatgggcgtgaacgtgccggtgctcagcggcgcggcctcggtg ctgctgcaccgcttcgacccgcgcaccgtgctgcaggccatctccacgtacaaggtgagc tggtggtacagcatcgcgccgatgaacgtggcctgcatgcaggtgccggacatcgcggcc ttcgacctgggcagcctgaagatgaacccggtaaccagcttcggcatcacattcaccgaa ccgctcgcgcagcagtggcgctcgcatgcgcccaactgcacctcgttcgaagccgcctac ggcctgagcgagacccacacctgcgacacctacacgccgcaccatgcgccgcgctggggc acgcagggcatcgcggtgccgggcgtgaccatccgcatcatcgacaccgacacccaggcc gacatgccggtgggcgaggtcggcgagatcgtgctgaccagcaagggctcgttcaagggc tactggaacaagcccgaggccaccgccgccacgctgcgcaacggctgggtgcacaccggc gacatgggcaagctcgacgccgacggctacctcaccttcatcggccgcttcaaggaaatg atcaaggtctcgggctacagcgtgttcccggaagaggtcgagaccatcctcatcaagcat ccggcggtggcgcaggcggcggtcatcgcgcagcccgatgcggagaagggcgaggtcgtg aaggccttcatcgtgcgcaagcccggcgccgcgctggaggccgacgcgctcgtggcctgg gcgcgcgacaacatggcgagctacaaggcgccgcgcgccgtgagcttcatcgacgcactg ccgaccaccggcgccggcaaggtgctgcgccggctgctcaaagacaaaagctga

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