Variovorax sp. PMC12: C4F17_25175
Help
Entry
C4F17_25175 CDS
T05380
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00450
Selenocompound metabolism
vam00970
Aminoacyl-tRNA biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
C4F17_25175
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4F17_25175
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_25175
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_25175
Enzymes [BR:
vam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
C4F17_25175
Amino acid related enzymes [BR:
vam01007
]
Aminoacyl-tRNA synthetase
Class I (U)
C4F17_25175
Transfer RNA biogenesis [BR:
vam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C4F17_25175
Prokaryotic type
Other AARSs
C4F17_25175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
Anticodon_3
tRNA-synt_1f
tRNA-synt_1e
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
AVQ83974
UniProt:
A0A2P1VFP3
LinkDB
All DBs
Position
1:complement(5362932..5365031)
Genome browser
AA seq
699 aa
AA seq
DB search
MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI
AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIS
TKSVEQFYDPEKGMFLADRFIKGECPNCHSKDQYGDNCEVCGAVYAPTELINPYSALSGA
KPELRSSEHFFFKLSDPRCEAYLKEWTAAPGHVQSEVQNKIREWLYKDDEGKGGLGDWDI
SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPDL
EQVHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGTGIDPLKYL
SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAAGFIGKRFGG
RLGEVSADGDALLFTLRDAATQIHTLYDGRDYARALREVMALADKVNEYVDQNKPWELAK
KEGAEARLHDVCTVCIEAFRLLTLYLKPVLPALALNVEAFLKTSPLVWADAAQSLPAGHA
IGDYKHLMQRADPKQVDKLFDAPEAPAAAPAAATEAQELPGGEAIAPAITIDDFAKIDLR
IAKIVACEKVEGSTKLLRLTLDAGEGKTRNVFSGIASAYQPEQLVGKLTVLVANLAPRKM
KFGISEGMVLAASHGDEKAHPGIHVLEPWPGATPGMRVR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgcgcaagctcttcgtcaccaccgccctgccgtacgccaacggcaagttc
catatcggccacatgatggaatacatccaggccgacatctgggtgcggaaccagcggatg
aacggcgccgaggtcaacttcgtctgcgccgacgacgcgcacggcgcggccatcaccatc
gcggccgacaaggccggcgtgacgccgcaggccttcgtggccgagattgcggccgggcgc
aagccgtatctcgacggctactacatctccttcgacaactggcactcgaccgacgcgccc
gagaaccaccagctcgcgcaggacatctaccgcgacctgcgggccaacggcctgatcagc
accaagagcgtcgagcagttctacgaccccgaaaagggcatgttcctggccgaccgcttc
atcaagggcgagtgccccaactgccattcgaaggaccagtacggcgacaactgcgaggtg
tgcggcgccgtgtacgcgcccaccgagctgatcaatccctactcggccctgtcgggcgcc
aagcccgagctgcgcagctcggagcacttcttcttcaagctctccgacccgcgctgcgag
gcctacctgaaggaatggaccgccgcccccggccacgtgcagtccgaggtgcagaacaag
atccgcgaatggctctacaaggacgacgagggcaagggcggcctcggcgactgggacatc
agccgcgacgcgccgtacttcggcatcgagatccccgatgcgccgggcaagtacttctac
gtgtggctcgacgcccccgtgggctacctggcgtcgctgaagaacctgctggacaagcgc
tgcatcgaactcggcggcgacggcatctcgtacaccgagtacatggccgaccccgacctc
gagcaggtgcacttcatcggcaaggacatcatcaccttccacacgctgttctggcccgcg
atgctgcacttcagcggccgcaaggcgcccgacgccgtgtacgtgcacggccacctcacg
gtgagcggcgagaagatgagcaagagccgcggcaccggcatcgacccgctcaagtacctg
tcgatcgggctcgaccccgaatggctgcgctactacatcgccgccaagctcaacggccgc
aacgaagacatcgacttcaaccccgaggacttcgtggcgcgcgtcaacagcgacctcgtg
ggcaagtacatcaacatcgccagccgcgcggcgggcttcatcggcaagcgcttcggcggc
aggctgggcgaggtgtcggcagacggcgacgcgctgctgttcacgctgcgcgacgcggcc
acccagatccacacgttgtacgacggccgcgactacgcccgcgccctgcgcgaggtgatg
gcgctggccgacaaggtgaacgagtacgtcgaccagaacaagccctgggagctggccaag
aaggaaggcgccgaggcgcgcctgcacgacgtgtgcaccgtgtgcatcgaggccttccgc
ctgctcacgctgtacctgaagccggtgctgccggcgctggcgctgaacgtcgaggccttc
ctgaagacctcgccgctggtctgggccgacgcggcgcagtctctgcccgcgggccacgcc
atcggcgactacaagcacctgatgcagcgcgccgaccccaagcaggtcgacaagctgttc
gatgcgcccgaggcacccgctgcggcacccgccgccgcgacggaagcccaggagctgccc
ggcggcgaagccatcgcgcccgccatcaccatcgacgacttcgcgaagatcgacctgcgc
atcgcgaagatcgtggcctgcgagaaggtcgaaggctcgaccaagctgctgcgcctgacg
ctcgacgcgggcgaaggcaagacccgcaacgtgttcagcggcatcgcctcggcctaccag
cccgagcagctagtgggcaagctcacggtgctggtcgccaacctcgcgccgcgcaagatg
aagttcggcatcagcgaaggcatggtgctggccgcgagccacggcgacgaaaaggcccac
cccggcatccacgtgctggagccgtggccgggcgcgacgccgggcatgcgcgtgcgctga
DBGET
integrated database retrieval system
