Variovorax sp. PMC12: C4F17_27650
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Entry
C4F17_27650 CDS
T05380
Name
(GenBank) cyclic peptide transporter
KO
K06160
putative pyoverdin transport system ATP-binding/permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_27650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_27650
Transporters [BR:
vam02000
]
ABC transporters, eukaryotic type
Other subfamilies
Other ABC transporters
C4F17_27650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_16
AAA_21
SMC_N
AAA_22
AAA_29
MobB
Zeta_toxin
AAA_23
nSTAND3
AAA_15
NACHT
DLIC
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AVQ84855
UniProt:
A0A2P1VI64
LinkDB
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Position
2:complement(4190..5869)
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AA seq
559 aa
AA seq
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MQTQPASAKASDLLRLLQPFTPWIALSSVTGIGAGVATVALLATINEVLSRPGGMAGGLL
LTFVALCALALVGRAVSDISNNVVGQRLVAQVRKDLAQKILAAPIDALERYRMHRLMPVL
TQDVDMISDVAFMLAATMISLAIALGCLGYLAWLSLPLFGLLVVAMLIGVAVQTWAHGRG
IAGFFQSREQEELLHKAYRGISEGAKELRMHRARRARVYEEQIARTVDNIRDINRRAINI
FVLATSFGSALFFLLIALILGWAAWRTTDPVVLSGFVLVLLFIKGPIDQIVGALPHLGRA
RVAFERIADLSARFATPEPHLHLGSPPTSPPLRNAIELSGVRYAFDTPEGSEAFSLGPVD
LQIGRSEIVFVVGDNGSGKTTLIKLLLGLYVPQQGEVVLDGKPITPETRDDYRQLFTTVF
SDFYLFEDLVAGEEGGHQALPETALPYLQRLEIAHKVSVKDGAFSTTDLSTGQRKRLALV
HAYLEGRPVLVFDEWAADQDPTFRHLFYTELLPELRAKGHSLVVISHDDRYFHVADRIVH
MKAGRIAQDTKAPAPGLAA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacccaacccgccagcgccaaggcgtccgaccttcttcggctgctgcaacccttc
actccctggatcgcgctctcgtccgtcaccggcatcggagcgggcgtggccaccgtggcg
ctgctggcaaccatcaacgaggtgctcagccgacccggcggcatggccggcggcctgctg
ctgaccttcgtcgcgctgtgcgccctggcgctcgtcggccgcgcggtgtccgacatctcg
aacaacgtcgtgggccagcggctggtcgcgcaggtgcgcaaggacctggcccagaaaatt
ctcgcggcgcccatcgatgcgctggagcgctaccgcatgcaccggctgatgcccgtgctc
acgcaggacgtggacatgatcagcgacgtggccttcatgctggccgccaccatgatttcc
ctggccatcgcgctgggctgcctgggctacctcgcgtggctgtcgctgccgctgttcggc
ctgctggtggtggcgatgctgatcggcgtggcagtccagacctgggcccacggtcgtggc
atcgcgggcttcttccagtcgcgcgaacaggaagagctgctgcacaaggcctaccgcggc
atcagcgaaggcgccaaggaactgcgcatgcatcgtgcccgccgcgccagggtgtacgag
gagcagatcgcccgcaccgtcgacaacatccgcgacatcaaccgccgcgcgatcaacatc
ttcgtgctggccacgtccttcggctcggcactgttttttctgctgatcgcgctgatcctc
ggctgggccgcctggcgcacgaccgacccggtggtgctcagcggcttcgtgctcgtgctg
ctgttcatcaaggggccgatcgaccagatcgtcggtgccctgccgcacctgggccgcgcc
agggtggcgttcgagcgcatcgccgacctgtcggcccgcttcgccacgccggagccgcac
ctgcacctcggctccccgccgacttcaccgccgctgcgcaacgccatcgagctgagcggc
gtgcgctacgcgttcgacacgccagagggcagcgaggccttctcgctggggccggtcgac
ctgcagatcgggcgcagcgagatcgtcttcgtcgtgggcgacaacggctcgggcaagacc
acgctcatcaagctgctgctcgggctctacgtgccgcagcagggcgaggtcgtgctcgac
ggaaagcccatcacacccgagacgcgcgacgactaccgccagctgttcaccaccgtgttc
tccgacttctatctgttcgaggatctcgttgccggcgaggagggcggccaccaggcgctg
cccgagaccgcgctgccctacctgcagcggctggagatcgcgcacaaggtgtctgtgaag
gacggcgcgttcagcaccaccgatctgtctacgggccagcgcaagcggctcgcgctggtg
cacgcctacctggaaggccgccccgtgctggtgttcgacgaatgggccgccgaccaggac
ccgaccttccgccatcttttctacaccgagctgttgcccgagctgcgcgccaaagggcat
tcgctggtggtcatctcgcacgacgaccgctacttccacgtggccgaccgcatcgtccac
atgaaggccgggcgcatcgcgcaggacaccaaggcgccggcgccaggccttgcggcctga
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