Variovorax paradoxus S110: Vapar_0229
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Entry
Vapar_0229 CDS
T00916
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00470
D-Amino acid metabolism
vap01100
Metabolic pathways
vap01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Vapar_0229
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Vapar_0229
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Vapar_0229
Enzymes [BR:
vap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Vapar_0229
Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Precursor biosynthesis
Racemase
Vapar_0229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ACS16892
UniProt:
C5CX88
LinkDB
All DBs
Position
1:246138..247238
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AA seq
366 aa
AA seq
DB search
MPRPILATVHTAALRHNLDRARRAAVDARVWAVVKANAYGHGIERVYEGLRGADGFALLD
LAEAERVRALGWRGPVLLLEGVFDARDLELCSRLDLWHTVHCDEQIDMLAAHKTLKPQRV
FLKMNSGMNRLGFAPERFGSAWTRLNALPQVDEISLMTHFSDADGARGIAHQLEVFERAT
HDLLGERSIANSAATLRHARQTRGDWVRPGIVLYGSAPDFPEHDAAHWQLQPTMTLSTKL
IGIQTLKAGDTIGYGSNFTAEGPLTIGVAAVGYADGYPRHCNTGTPVLVNGVRTRMVGRV
SMDMITVDLTPVPEAKFGTEVTLWGRSAVSGAVLPIDEVAQAAGTVGYELMCAVAPRVPF
APADGE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccccattctcgccactgtccacaccgccgcgcttcgccacaacctcgaccgg
gcacggcgtgccgcggtcgatgcccgcgtctgggccgtggtcaaggccaatgcctatggc
cacggcatcgagcgggtctatgagggcctgcgcggcgccgacggctttgcgctgctcgac
ctggccgaggccgagcgcgtgcgcgcccttggctggcgcggcccggtgctgctgctcgaa
ggcgtgttcgacgcgcgcgacctggagctgtgctcgcggctcgacctgtggcacacggtg
cactgcgacgagcagatcgacatgctcgcggcccacaagacgctcaagccgcagcgcgtg
ttcctcaagatgaattccggcatgaaccgcctgggcttcgcccccgagcgcttcggctcg
gcctggacccggctgaacgcgctgccccaggtcgacgagatctcgctgatgacgcatttc
agcgacgccgacggcgcacgcggcatcgcgcaccagctcgaagtgttcgagcgcgccacc
cacgacctgctgggcgaacgctccatcgccaacagcgccgccaccctgcgccatgcccgc
cagacccgcggcgactgggtgcgccccggcatcgtgctgtacggcagcgcgcccgacttt
cccgagcacgacgcggcgcactggcagctgcagcccaccatgacgctctcgaccaaactg
atcgggatccagacactgaaggcgggcgacaccatcggctacggctccaacttcacggcc
gaggggccgctcaccatcggcgtggccgcggtcggctatgccgacggctatccgcgccac
tgcaacaccggcacgccggtgctggtgaacggcgttcgcacccgcatggtgggccgcgtg
agcatggacatgatcacggtcgacctcacgcccgtgcccgaggccaagttcggcaccgag
gtcacgctctggggccgctcggccgtgagcggcgcggtgctccccatcgacgaggtcgcg
caggccgccggcaccgtcggctacgagctcatgtgcgcggtggcgccgcgcgtgcccttc
gcgccggccgacggcgaatga
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