Variovorax paradoxus S110: Vapar_0416
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Entry
Vapar_0416 CDS
T00916
Name
(GenBank) alpha amylase catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00052
Galactose metabolism
vap00500
Starch and sucrose metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Vapar_0416
00500 Starch and sucrose metabolism
Vapar_0416
Enzymes [BR:
vap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
Vapar_0416
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
ACS17079
UniProt:
C5CJ79
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All DBs
Position
1:complement(452326..453999)
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AA seq
557 aa
AA seq
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MRSNNSSNGEWWRGAVIYQIYPRSFMDSNGDGIGDLPGITSRLDHVASLGVDAIWVSPFF
RSPMKDFGYDVADYRAVDPIFGTLADFDEMLARAHALGLKIIIDQVLSHTSDQHAWFAES
RASRDNSKADWYVWADPRPDGTPPNNWLSVFGGPAWQWDSRRRQYYLHSFLQEQPDLNFH
CAEVQQALLGEVRFWCERGVDGFRFDACNHQFHDALLRDNPPASAASLDEVSTVRADNPY
AMQQHLYDKSQMENLRFLESLRGLLDDYGAVALGEVGDENAPPVMAQYTELGKRLHLAYS
FSLLTAEHSARHLRHQVETLDQALAPTGGWGCWAVSNHDVPRVATRWSGGGPEDTRRDRL
WLALLLALRGSASIYQGEELGLPEAEVPFELLQDPYGRAFWPEFKGRDGCRTPMPWKADE
LHAGFTTGGPWLPVYGRHLPLAVDRQSTDPDSMLAFSRALLRWRRAQPLLRTGSIAFIDA
PEPVLWFERREGNQSLQAVFNLGGESVSIALHGALEPLAGHPLASSSTLQAGAERRMLRL
APYGVFFGRPAGEEEPM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcaacaacagcagcaatggcgaatggtggcgcggcgcggtgatctaccagatc
tacccgcgcagcttcatggacagcaacggcgacggcatcggcgacctgcccggcatcacc
tcgcggctcgatcatgtggcgagcctgggggtcgatgcgatctgggtgtcgcccttcttc
cgctcgccgatgaaggacttcggctacgacgtggccgactaccgcgcggtcgatccgatc
ttcggcacgctggccgatttcgacgagatgctggcgcgcgcccatgcgctcggcctcaag
atcatcatcgaccaggtgctctcgcacacctccgaccagcacgcctggttcgccgaaagc
cgcgcgagccgcgacaactccaaggccgactggtacgtgtgggccgacccgcggcccgac
ggcacgccgcccaacaactggctctccgtcttcggcgggccggcctggcagtgggattcg
cgccgccgccagtactacctgcacagcttcctccaggagcagcccgacctgaacttccat
tgcgccgaggtgcagcaagcgctgctgggcgaagtgcgcttctggtgcgagcgcggcgtg
gacggcttccgcttcgatgcctgcaaccaccagttccacgatgcgctgctgcgcgacaac
ccgccagcgagcgccgcctcgctggacgaggtgagcacggtgcgggccgacaacccctat
gccatgcagcagcacctctacgacaagagccagatggagaacctgcgcttcctcgaaagc
ctgcgcgggctgctcgacgactatggcgcggtcgcgctcggcgaggtcggcgacgagaac
gcgccgcccgtcatggcgcagtacaccgaactgggcaagcgcctgcacctggcctacagc
ttcagcctgctgacggccgagcacagcgccaggcacctgcgccaccaggtcgagacgctc
gaccaggcgctcgcgccgaccggcggctggggctgctgggccgtctccaaccacgacgtg
ccgcgcgtggccacgcgctggagcggcggcggcccggaagacacgcggcgcgaccggctc
tggctcgcgctgctgctcgcgctgcgcggcagcgccagcatctaccagggcgaagagctc
ggcctgcccgaggccgaggtgccgttcgagctgctgcaggacccctacggccgcgccttc
tggcccgaattcaagggccgcgacggctgccgcacgcccatgccctggaaggccgacgaa
ttgcacgccggcttcaccaccggcgggccctggttgccggtctacggccgccacctgccg
ctggcggtcgaccgccagtccaccgatccagattccatgctcgcattcagccgcgcgctg
ctgcgctggcgccgcgcccagccgctgctgcgcaccggcagcatcgccttcatcgatgca
ccggagccggtgctgtggttcgagcggcgcgaagggaaccaatcgctgcaggccgtcttc
aacctgggaggcgagtcggtgtccatcgcgctgcacggggcgctcgagccgctcgcgggg
catccgctggcatcgtcgtcgaccctgcaggccggcgctgaaaggcgcatgctgaggctg
gcgccctacggcgtctttttcggccgccccgccggcgaagaagaaccgatgtga
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