Variovorax paradoxus S110: Vapar_0473
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Entry
Vapar_0473 CDS
T00916
Name
(GenBank) putative RNA methylase
KO
K25137
23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.173
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vap03009
]
Vapar_0473
Enzymes [BR:
vap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
Vapar_0473
Ribosome biogenesis [BR:
vap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Vapar_0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
THUMP
MTS
Methyltransf_25
Methyltransf_31
N6_Mtase
Methyltransf_3
AviRa
Motif
Other DBs
NCBI-ProteinID:
ACS17136
UniProt:
C5CJD6
LinkDB
All DBs
Position
1:516023..517264
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AA seq
413 aa
AA seq
DB search
MNDLSLFLPCAAGVEEFLAQEVHALTGRVGQDLLTLRGGVRVRAEWRDALKLNLHSRLAQ
RVLVELAHAPYRSENDLYAIASGVAWEIWFTPKQTFKIETTAQHSPLQSLNFATLRIKDA
IADRFRAKAGGVRPSIETQWPDCRVFAHLTTEHCTLYIDTSGEPLFKRGWRQDKGDAPLK
ETLAAAMLAASGWWNPETGAVAAEPLYDPCCGSGTIAIEAAQIARGIAAGSLRRFGFEKL
LPFQAHVWDAIRKEAQSSAVPRDVAIFGSDVSHRMVDFAERNAERAGVADAIEFRGGDAL
QRMPPAEGGVIMLNPPYGERIEVGGVARFGAREAAQTPGEGGGEGSDGGGDFFPQLATHW
KKNYAGWTAWVLTPDLKLPRQMRLKESRRVPMWNGPIECRLFRFDMVAGSARK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatctctctctctttttgccttgcgccgccggcgtcgaggaattcctcgcgcag
gaagtccatgcgctcaccggccgcgtcggccaggacctgctcacgctgcgcggcggcgtg
cgggtgcgcgccgaatggcgcgacgcgctcaagctcaacctgcacagccggctcgcccag
cgcgtgctggtcgaactggcccacgcgccctaccgcagcgagaacgacctctacgccatc
gcgagcggcgtggcctgggagatctggttcacgcccaagcagaccttcaagatcgagacc
acggcgcagcacagcccgctgcagagcctgaacttcgccaccctgcgcatcaaggacgcc
attgccgaccgcttccgcgccaaggcgggcggcgtgcgcccgagcatcgagacccagtgg
cccgactgccgcgtgttcgcccacctgaccaccgagcactgcacgctctacatcgacacc
tccggcgagccgctcttcaagcgcggctggcgccaggacaagggcgatgcgccgctgaag
gaaacgctggccgccgccatgctggccgccagcggctggtggaaccccgaaaccggcgcc
gtggccgccgagccgctgtacgacccctgctgcggcagcggcaccatcgccatcgaggcg
gcgcagatcgcgcgcggcattgcggccgggtcgctcaggcgcttcggcttcgagaagctg
ctgccgttccaggcgcacgtctgggacgccatcaggaaagaggcccagtcgtcggcggtg
ccgcgcgatgtcgccatcttcggctccgacgtctcgcaccgcatggtcgactttgccgag
cgcaacgcggagcgcgccggcgttgccgatgccatcgagttccgcggcggcgacgcgctg
cagcgcatgccgccggccgagggcggggtgatcatgctcaacccgccgtacggcgagcgc
atcgaggtcggcggcgtggcgcgcttcggcgcccgcgaggccgcgcagaccccgggcgag
ggcggcggtgaaggcagcgacggcggcggcgatttctttccgcagctcgccacccattgg
aagaagaactacgccggctggaccgcctgggtgctcacgcccgacctgaagctgcccagg
cagatgcggctgaaggaatcgcgccgcgtgccgatgtggaacgggcccatcgagtgccgg
ctgttccgtttcgacatggttgcgggttcggccaggaagtag
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