Variovorax paradoxus S110: Vapar_0834
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Entry
Vapar_0834 CDS
T00916
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
C4-dicarboxylate transporter, DctM subunit
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_0834
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0834
Transporters [BR:
vap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Vapar_0834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Otopetrin
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ACS17487
UniProt:
C5CMI6
LinkDB
All DBs
Position
1:complement(918563..919861)
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AA seq
432 aa
AA seq
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MIPTLLFVAFVAMMLVGVPIGAALGLAGAACIALANSDAQWFGLLAVPQNFYAGLGKYPL
LAIPMFVLVGSIFDRSGVALRLVNFAVAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAA
AVGAVMIAAMSRAGYPAAFSASVVGAAAATDILIPPSVAFIVYSVLVPGASVPALFAAGM
IPGVMAGLALMIPAVLLARQHKMGALEATLPRPPFWKSFREAVWGLAAPVLILGGMRAGW
FTPTEAAVVAVFYGLFVGMCVHRTIKVRDLFVILRESGELSAVILLVVSLAGIFAYSLST
LGIIDPVTRAIVNSGLGEYGILALLILLLITVGMFLDGVSIFLIFVPLLLPIVQYYKWDP
VWFGVILTLKVALGQFTPPLAVNLMVSCRIAKVRMEETVRWVGWMLFSMFVVMVLVIVFP
ELALWLPRKLGY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgatccccaccctgctcttcgtcgccttcgtcgcgatgatgctggtgggcgtgcccatc
ggcgccgcgctcggcctggccggcgccgcctgcatcgcgttggccaacagcgacgcccag
tggttcggcctgctggccgtgccgcagaacttctatgccggcctcggcaagtacccgctg
ctggccatcccgatgttcgtgctggtgggctccatcttcgaccgctcgggcgtggcgctg
cggctcgtgaactttgcggtggcgatcgtcgggcgcgggcccggcatgctgccgctggtg
gccattgcggtggcgatgttcctcggcggcatctcgggctcgggcccggccaatgccgct
gccgtgggcgcggtgatgatcgcggccatgtcgcgcgcgggctacccggccgccttctcg
gccagcgtggtgggcgccgcagcggccaccgacatcctgattccgccctcggtcgcgttc
atcgtctactcggtgctggtgcccggcgcctcggtgccggcgctctttgcagccggcatg
atcccgggcgtgatggccggcctggcgctgatgatcccggccgtgctgctggcccgccag
cacaagatgggcgcgctcgaagcgacgctgccgcgcccgccgttctggaagagctttcgc
gaagcggtctggggcctggcggcgccggtgctgatcctgggcggcatgcgcgcgggctgg
ttcacgcccaccgaggccgcggtggtggcggtgttctacggccttttcgtgggcatgtgc
gtgcaccggaccatcaaggtgcgcgacctgttcgtcatcttgcgcgaatcgggcgagctc
tcggcggtgattttgctggtggtgtcgctcgcgggcatcttcgcgtactcgctttccacg
ctgggcatcatcgacccggtgacgcgcgccatcgtgaattcgggcctcggcgaatacggc
atcctggcgctcctgatcctgctgctcatcacggtgggcatgttcctggacggcgtgtcg
atcttcctgatcttcgtgccgctcctgctgccgatcgtgcagtactacaaatgggatccg
gtgtggttcggcgtgatcctcacgctcaaggtcgcattgggccagttcacgccgccgctc
gcggtcaacctgatggtgtcgtgccgcatcgccaaggttcgcatggaagaaaccgtgcgc
tgggtcggctggatgctgttctcgatgttcgtggtgatggtgctggtgatcgtgtttcct
gagcttgcgctctggttgccgcgcaagctggggtattga
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