Variovorax paradoxus S110: Vapar_1353
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Entry
Vapar_1353 CDS
T00916
Name
(GenBank) secreted pectate lyase-family protein
Organism
vap
Variovorax paradoxus S110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pec_lyase
Glyco_hydro_127
Motif
Other DBs
NCBI-ProteinID:
ACS18004
UniProt:
C5CRS2
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Position
1:1466927..1468738
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AA seq
603 aa
AA seq
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MKRRNFVISTLSPLALSACGGGGDGPGFPPFPVPPPAPAPEPPPSTEALARKAMRRAAGF
MDETVSYRGGYVWAYLPDFSTIWGEMEARRTMCWIQPPGTPTAGHCMLDAYHATGDELFY
SAAERTALALVEAQHPAGGWNYIHDFAGEASLREWYATVGANGWRLEEFQHYYGNATFDD
AGTAVSSQFLLRMYLEKRDARFLAALQKAIGFVTQAQFSSGVADGGWPQRYPPSPDAISS
MPLPNPQQLPSGATAGMEDGDYTRHVTFNDDVAGENIKFLLMCVVALGDQSLVPYITRAM
DCLRRMQQPGPQAGWGLQHLATDQNGRLAGAPAGARSYEPRSLATHTTQTNVQQLFNYFR
LTGDRGYLARVPEALDWLDSCKLTDTMIAENPLLKGRTHPTFVELGTNQPRFVHRYGSNI
HNGAYYVDHDHRNTPSHYSAGRAIDIAGMRQTYAQLNGMSDAAVQQMVAASPLRHGEQRP
LPKYFSLREVDFADLFADRVMTTPVVSAADAAAVMDKLDPKGYWLAPLSAVTNPYKGDGP
STPYTGDAYRSKHVGDVFDTSPYDPADPPLIEPYVKKEQPQGITVASFVANMGKLIAFAA
PVA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaggaacttcgtcatttcgacactttctcccttggcgctgagcgcgtgcggc
ggcgggggagacggccccggctttccgccgttcccggtgccgccgccggcacccgcgccc
gaacctccgccgagcaccgaggcactggcgcgcaaggcgatgcggcgcgccgcgggcttc
atggacgagacggtgtcctatcgcggcggctacgtctgggcctacctgcccgacttctcc
accatctggggcgaaatggaggcgcgccgcaccatgtgctggatccagccgcccggcacg
ccgaccgccggccattgcatgctcgatgcctaccatgccacgggcgacgaactcttctac
agcgccgccgagcgcaccgcgctcgcgctggtcgaggcgcagcatccggcaggcggctgg
aactacatccacgactttgccggcgaagcctcgctgcgcgagtggtacgccaccgtgggc
gccaatggctggcggctcgaggagttccagcactactacggcaacgccaccttcgacgat
gcgggcacggcggtgtcgtcgcagttcctcttgcgcatgtacctggaaaagcgcgatgcg
cgcttcctggcggcgctgcagaaggccatcggcttcgtcacgcaggcgcagttcagctcc
ggcgtggccgacggcggctggccgcagcgctatccgccctcgcccgatgcgatctcgtcg
atgccgctgcccaacccgcagcagctgccttcgggcgcgaccgcgggcatggaagacggc
gactacacgcgccacgtcaccttcaacgacgacgtggcgggcgagaacatcaagttcctg
ctgatgtgcgtggtggcgctcggcgaccagagcctggtgccgtacatcacccgcgcaatg
gactgcctgcgccgcatgcagcagcccgggccgcaggccggctggggcctgcagcacctg
gccacggaccagaacggccgcctggccggggcgcccgccggcgcgcgcagctacgagccg
cggtcgctggccacgcacacgacgcagaccaacgtgcagcagctgttcaactatttccgc
ctgacgggcgaccgcggctacctggcgcgcgtgcccgaggcgctcgactggctggacagc
tgcaagctcaccgacaccatgattgcggagaatccgctgctcaagggccgcacgcatccc
actttcgtggagctcggcaccaaccagccgcgcttcgtgcaccgctacggttcgaacatc
cacaacggcgcctactacgtcgaccacgaccatcgcaatacgcccagccactactcggcc
ggccgcgccatcgacatcgcgggcatgcgccagacctacgcccagctcaacggcatgagc
gacgccgcggtccagcagatggtggcggcttctccgctgcgccatggcgagcagcggccg
ctgcccaagtatttttcgctgcgcgaggtggactttgccgacctgttcgccgaccgcgtg
atgacaacccccgtggtgagcgccgccgatgccgcggccgtgatggacaagctcgacccc
aagggctactggctcgcgccgctgtcggccgtgaccaacccctacaagggcgatgggcct
tccacgccgtacacgggcgatgcctaccgcagcaagcatgtgggcgacgtgttcgacacc
tcgccctacgacccggcggacccgccgctgatcgagccctacgtcaagaaggagcagccg
cagggcatcacggtcgcgagcttcgtcgccaacatgggcaagctgattgcattcgccgcg
ccggtcgcctaa
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