Variovorax paradoxus S110: Vapar_2022
Help
Entry
Vapar_2022 CDS
T00916
Name
(GenBank) poly(R)-hydroxyalkanoic acid synthase, class I
KO
K03821
poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:
2.3.1.304
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00650
Butanoate metabolism
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Vapar_2022
Enzymes [BR:
vap01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.304 poly[(R)-3-hydroxyalkanoate] polymerase
Vapar_2022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhaC_N
Abhydrolase_1
DUF3141
Motif
Other DBs
NCBI-ProteinID:
ACS18667
UniProt:
C5CWB2
LinkDB
All DBs
Position
1:2164492..2166243
Genome browser
AA seq
583 aa
AA seq
DB search
MKQQATGADAFAPLQQALSEGWTKALESLQQSAVQGASAFNGGGTPLWQLPPGATLPELP
KVSIAPEKLQSIQQQYMAEATELWRRGLDARPESDRRFAGEAWGSNPLAAFSAAVYLLNG
RTLLSMAEAIDADEKTKARMRFAVEQWMAAASPSNSLAFNAEAQKKAIDTQGESIAKGIQ
NLLHDVKQGHLSMTDESAFEVGRNVATTEGAVVFENEYFQLLEYKPLTAKVYERPFLLVP
PCINKFYILDLQPENSLIRYANEQGHRVFVVSWRNPDESLAHATWDDYIENAAIKAIHLV
QEIGGSKQINALGFCVGGTILSTALAVLAARGEKPAASVTLLTTFLDFSDTGILDIFVDE
AMVAYREMQLGKGGLLPGMDLASTFSFLRPNDLVWNYVVGNYLKGETPPPFDLLYWNSDA
TNLPGPFYTWYLRNTYHENKLAKPNALTVCGEKIDLGRIDIPAYIYGSREDHIVPIGGAY
ASTQLLPGKKRFVMGASGHIAGVINPPAKKKRSHWTREDGKFPKTQAEWLAGATEHPGSW
WTDWAQWLKGHAGKQVPAPKAYGNGKAYKAIEPAPGRYVKARA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacaagcaacgggggccgacgcgttcgcgcccctccagcaggctctttcggag
ggatggaccaaggcgctggaatcgctccagcagtccgccgtacagggggcctcggccttc
aacggcggcggcacgccgctgtggcaattgcctccgggggcaacgctgcctgaattgccg
aaagtctccatcgcgcccgagaagctgcagtcgatccagcagcaatacatggccgaggcc
accgagctctggcgccgcggcttagacgccaggcccgagagcgacaggcgctttgccggc
gaagcctggggcagcaacccgctcgcggccttctcggcggcggtctacctgctcaatggc
cgcaccctgctcagcatggccgaggccatcgacgccgacgaaaagaccaaggcgcgcatg
cgttttgcggtcgagcagtggatggcggccgcatcgcccagcaactcgctcgccttcaac
gcagaggcgcagaagaaagccatcgacacgcagggcgagagcattgccaagggcatccag
aacctgctgcacgacgtgaagcagggccacctcagcatgaccgacgaaagcgccttcgaa
gtggggcgcaacgtggccaccaccgagggcgccgtggtgttcgagaacgagtatttccaa
ctgctcgaatacaagccgctcacggccaaggtctacgagcggccgttcctgctggtgccg
ccgtgcatcaacaagttctacatcctcgacctgcagcccgagaactccctgatccgctat
gccaacgagcagggccaccgcgtgttcgtggtgagctggcgcaaccccgacgagtcgctg
gcccacgccacctgggacgactacatcgagaatgccgccatcaaggcgatccacctcgtg
caggagatcggcggcagcaagcagatcaatgcgctgggcttctgtgtgggcggcaccatc
ctgagcaccgcgctggccgtgctggcggcgcgcggcgaaaagccggccgcttcggtcacg
ctgctcaccacctttctcgacttcagcgacaccggcatcctcgacatcttcgtggacgag
gcgatggtggcgtaccgcgaaatgcagctgggcaagggcggcctgctgccgggcatggac
ctggcctcgaccttcagcttcctgcggcccaacgacctggtctggaactacgtggtcggc
aactatctgaagggcgagaccccgccgcccttcgacctgctctactggaacagcgacgcc
accaacctgccgggcccgttctacacctggtacctgcgcaacacctaccacgagaacaag
ctcgccaagcccaatgcgctcacggtctgcggcgagaagatcgacctcggcaggatcgac
atcccggcctacatctacggctcgcgcgaagaccacatcgtgccgatcggcggcgcctat
gcctccacgcagctgctgccgggcaagaagcgcttcgtcatgggcgcctcgggccacatc
gccggcgtgatcaatccgcccgccaagaaaaagcgcagccactggacgcgcgaggacggc
aagttccccaagacccaggccgaatggctggccggcgccaccgagcatcccggcagctgg
tggaccgactgggcccaatggctcaagggccatgcgggcaagcaggtcccggcgcccaag
gcctacggcaacggcaaggcctacaaggccatcgagccggcgccgggacgctacgtcaag
gccagggcctga
DBGET
integrated database retrieval system
