Variovorax paradoxus S110: Vapar_3733
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Entry
Vapar_3733 CDS
T00916
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
Organism
vap
Variovorax paradoxus S110
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_23
HTH_20
GerE
HTH_10
HTH_40
HTH_11
HTH_24
Phage_antitermQ
LexA_DNA_bind
VMAP-M18
Motif
Other DBs
NCBI-ProteinID:
ACS20349
UniProt:
C5CUD6
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Position
1:3931777..3932400
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AA seq
207 aa
AA seq
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MRDIVQELLAHYADLRRQLTRDLRDPHYAADIAQSSFERVYAHALKMNNGIRIDDAAPDG
TQQGAGGIESPRALLFRVARNLCVDDARRRKVAQDWVGTHFNSGSRQVAPSCEFIASQQQ
VLARVVETLETLPPRRREVFLLFRAYGHTRAEIAQQLNISEMAVAKHLLRAAIDCSRVFA
RLRSELVEQPAVSMRPGFDAMFAEDFA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacatcgtccaggaactgctggcccactatgcggacttgcgccggcagctgacg
cgcgacctgcgcgacccgcactacgcggcggacatcgcgcaatccagcttcgagcgcgtg
tatgcgcacgcgctcaagatgaacaacggcatccgcatcgacgatgcggcgccggacggc
acgcaacaaggcgccggcggcatcgagtcgccccgcgccctgctgtttcgcgtggcgcgc
aacctgtgcgtggacgatgcgcgccgccgcaaggtggcgcaggactgggtcggcacgcat
ttcaactcgggctcgcgccaggtcgcgccttcctgcgaattcatcgcgtcccagcagcag
gtgctggcgcgcgtggtcgagacgctcgaaacgctgccgccccgccggcgcgaagtgttc
ctgctgttccgcgcctacggacacacgcgcgccgaaatcgcgcagcaactgaacatcagc
gagatggcggtcgccaagcacctgctgcgcgccgccatcgactgctcgcgcgtgttcgcc
cggctgcgttcggagctggtcgagcagccggccgtctcgatgcgcccgggcttcgacgca
atgttcgccgaagacttcgcctga
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