Variovorax paradoxus S110: Vapar_3817
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Entry
Vapar_3817 CDS
T00916
Name
(GenBank) transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_3817
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Vapar_3817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ACS20431
UniProt:
C5CUZ5
LinkDB
All DBs
Position
1:complement(4035511..4036281)
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AA seq
256 aa
AA seq
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MPRSTDISAFEPIPAESAGAPLYRLVKRSLLRAIESGRCAAGSVLPSESELAAALGVSIG
TLRHATDDLVAEHILVRRQGRGTFVAVHNDDRFMFQFFHVERSDGLRQAPQVEFVAFERM
RMDEEPAQALGLRTGEPAIQIDNRLLLQGRAVIHDRLTLPALLFKGLTEKRFRERPSTIY
HLYQTEFGITVTLARERARAMAADRSVVRILGVAPGAPVMEVRRTALTFGDKPVEYRVST
INTAQYEYVHLLSRPA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctcgacagacatctccgcgttcgaaccgattcccgccgagtcggcgggcgcg
ccgctctaccggctcgtcaagcgctcgctgctgcgcgccatcgagtcggggcgctgcgcg
gccggcagcgtgctgccgagcgagagcgagctggcggcggcgctcggcgtgtcgatcggc
acgctgcgccacgccaccgacgacctggtggccgagcacatcctcgtgcggcggcagggg
cgcggtaccttcgtggcggtgcacaacgacgaccgcttcatgttccagttcttccatgtg
gagcgcagcgacggcctcaggcaggcgccgcaggtggagtttgtcgccttcgagcgcatg
cgcatggacgaggagccggcgcaggcgctggggctgcgaaccggcgagccggccatccag
atcgacaaccggctgctgctgcagggccgggcggtgatccacgaccggctcacgctgccg
gcgctgctcttcaagggcctgaccgagaagcgctttcgcgagcggccgagcaccatctac
cacctgtaccagaccgagttcggcatcaccgtgacgctggcgcgcgaacgcgcacgcgcg
atggcggccgaccgcagcgtggtgcgcatcctgggcgtggcgccgggcgcgccggtgatg
gaggtgcggcgcaccgcgctcaccttcggcgacaagccggtggagtaccgcgtgtcgacc
atcaacacggcgcagtacgaatacgtgcacctgctgtcgcggccggcctga
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