Variovorax paradoxus S110: Vapar_4606
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Entry
Vapar_4606 CDS
T00916
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
vap
Variovorax paradoxus S110
Pathway
vap01503
Cationic antimicrobial peptide (CAMP) resistance
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_4606
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Vapar_4606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vap02022
]
Vapar_4606
01504 Antimicrobial resistance genes [BR:
vap01504
]
Vapar_4606
Two-component system [BR:
vap02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Vapar_4606
Antimicrobial resistance genes [BR:
vap01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Vapar_4606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
DUF4158
Motif
Other DBs
NCBI-ProteinID:
ACS21211
UniProt:
C5CL60
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All DBs
Position
1:complement(4890967..4891680)
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AA seq
237 aa
AA seq
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MPSPSPRTGLLVHVIEDDEDIRAETVFALGELGFDAEGFGDAPSFYKAFAVQPCDIAVVD
IGLPGESGLAVVSHLRAVQRRLGLVLVTARGELEDRLLGLREGADAYLVKPVNMLELAET
LNAVGRRLTVAPQGNAATLPAAPADWRLLEGDWILGDPEGRQMALTTSERAFLACLFGQR
GTAASRDDLIRALGGDVFDFDEHRIDAIASRLRRKAAKLGMRLPLHSVRGTGYVLAI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgccatccccgagcccgcgtaccggtcttctcgtccatgtgatcgaggacgacgaagac
atccgtgcagaaaccgtcttcgcactcggagagctcggcttcgacgcggaaggcttcggc
gacgccccgtcgttctacaaggcgttcgcggtccagccctgcgacatcgcggtggtggac
atcggcttgccaggcgagagcggcctcgcggtcgtttcacatctgcgcgcagtgcagcga
cggctcgggctggtgctggtgaccgcgcggggcgagctcgaggaccggctgctcgggctg
cgcgaaggtgcagacgcctacctggtgaagccggtgaacatgctggaattggccgagacg
ctgaacgccgtcggtcggcgactcacggtcgcaccgcaggggaacgcggcgaccctgccg
gccgcacccgccgactggcgcctgctcgagggcgactggatcctgggtgaccccgaaggc
cggcagatggcgctcaccaccagcgagcgcgccttcctcgcctgccttttcgggcagcgc
ggcacggcggcgagccgcgacgacctgatccgcgcgctcggtggcgacgtgttcgatttc
gacgagcaccgcatcgatgcaattgccagccggctgcggcgcaaggccgcgaagctcggc
atgcgcctgccgctgcattcggtgcgcggcacagggtacgtgctcgcgatctga
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