Variovorax paradoxus S110: Vapar_4859
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Entry
Vapar_4859 CDS
T00916
Name
(GenBank) ATP dependent DNA ligase
Organism
vap
Variovorax paradoxus S110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
ACS21463
UniProt:
C5CNA0
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Position
1:complement(5177539..5179194)
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AA seq
551 aa
AA seq
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MKDFAALYRELDASTSSLAKQAALQRYLREADPADAAWAVYFLAGGKPRQLVPTKLLRLL
AQEAAGLPEWLFDESYEAVGDLAETIALLLPPPTEAHDLGLARWVEEHLLPLREAGKAAP
DELPARLRAQWRQLAAEERLVYFKLITGAFRVGVSKLQVTQALAGVGGIDPKRVAQRLMG
YTHIGGRPRAEDYRALIAPESGAEQVQKTSGQPYPFFLAHAFNLPLEQFDAVLGPPAGWI
VEWKWDGIRAQLVKRAGASWLWSRGEELVTERFPELAVLGDALPDGTVLDGEIAVWRDDR
VQPFAELQKRIGRKTLGAKLLREIPVVLLAYDILEWEGRDLRALPQSERRLLLDELVTRM
QHPSLLPSPMLTGIAWSDFARQREAARSLGVEGMMLKRRDAQYGVGRTKDVGVWWKWKID
PLSIDAVLVYAQRGHGRRASLYSDYTFAVWDGPPEQGDRKLVPFAKAYSGLTDAEMARVD
AIIRKTTVESFGPVKSVKPTLVFELGFEGIARSTRHKSGIAVRFPRMLRWREDKPVAEAD
TLQTLAALLPS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacttcgccgcgctctaccgcgagctcgacgccagcacctcgagccttgccaag
caggccgcgctgcagcgctacctgcgcgaggccgatccggccgatgccgcctgggccgtg
tacttcctcgccggcggcaagccgcgccagctggtgcccaccaagctgctgcggctgctc
gcgcaggaggccgcgggcctgcccgaatggctgttcgacgagagctacgaggcggtcggc
gacctggccgaaaccatcgcgctgctgctgccgccgcccaccgaggcgcatgacctcggc
ctggcgcgctgggtcgaggagcacctgctgccgctgcgcgaggccggcaaggcggcgccg
gacgaactgcccgcgcggctgcgcgcgcagtggcgccagctcgcggccgaagagcggctg
gtgtacttcaagctcatcaccggcgccttccgcgtgggcgtgtcgaagctgcaggtcacc
caggcgctcgcgggcgtgggcggcatcgatcccaagcgcgtggcgcagcgcctcatgggc
tacacccacatcggcggccggccgcgcgcggaagactaccgcgcgctgatcgcgccggag
tcgggcgcggagcaggtgcaaaaaaccagcgggcagccctacccgttctttcttgcgcat
gccttcaacctgccgctcgaacaattcgatgctgtgctcggcccgccggccggctggatc
gtcgaatggaagtgggacggcatccgcgcgcagctggtcaagcgcgcgggcgccagctgg
ctgtggtcgcgcggcgaggaactggtgaccgagcgctttcccgagctggccgtgctgggc
gatgcgctgcccgacggcacggtgctcgacggcgagattgccgtctggcgcgacgaccgc
gtgcagcccttcgcggagctgcagaaacgcatcggccgcaagacgctgggcgcgaagctg
ctgcgcgagatcccggtggtgctgctggcctacgacatcctcgaatgggaagggcgcgac
ctgcgcgcgctgcctcaatcggagcgccggctcttgctcgacgaactcgtcacgcgcatg
cagcacccgtcgctgctgccgagcccgatgctcaccggcatcgcgtggagcgacttcgca
cgccagcgcgaagccgcgcgcagcctgggcgtggagggcatgatgctcaagcgccgcgac
gcgcagtacggcgtgggccgcaccaaggacgtgggcgtgtggtggaagtggaagatcgat
ccgctcagcatcgacgccgtgctcgtctacgcgcagcgcggccacggccggcgcgcgagc
ctctacagcgactacaccttcgccgtctgggatggcccgcccgaacagggggaccgcaag
ctcgtgccctttgccaaggcctattcgggcctgaccgacgccgagatggcgcgcgtggac
gcgatcatccgcaagaccaccgtcgaaagcttcggcccggtgaagagcgtcaagcccacg
ctggtgttcgagctcggcttcgaaggcattgcgcgcagcacgcgccacaagagcggcatc
gcggtgcgctttccgcgcatgctgcgctggcgcgaggacaagccggtggcggaggccgat
accttgcagacgctcgccgcgttgctgccgtcatga
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