Variovorax paradoxus S110: Vapar_5271
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Entry
Vapar_5271 CDS
T00916
Name
(GenBank) guanine-specific ribonuclease N1 and T1
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vap03019
]
Vapar_5271
03016 Transfer RNA biogenesis [BR:
vap03016
]
Vapar_5271
Enzymes [BR:
vap01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
Vapar_5271
Messenger RNA biogenesis [BR:
vap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Vapar_5271
Transfer RNA biogenesis [BR:
vap03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Vapar_5271
Prokaryotic type
Vapar_5271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
ACS21873
UniProt:
C5CS93
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All DBs
Position
1:5594844..5595254
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AA seq
136 aa
AA seq
DB search
MAAYASITSSVTKFALTGLMLVALATGAEARGWFGTGKPAQESIALSELPVQGQRTYEAI
LSGGPFRFEKDGTVFGNRERLLPPARRGHYREYTVATPGSRDRGARRIVCGGEQRTTPEA
CWYTADHYASFRRIAP
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacgcctcgatcacgtcttctgtcactaagtttgcgctcaccggcttgatg
ctggtggcattggcgacgggggccgaggcccgcggatggttcggcaccggaaagcccgcc
caggaatcgattgcactgtccgaactgccggttcagggccagcgaacctacgaagccatc
ctgagtggcggccccttccgattcgaaaaggacggcacggtatttggcaaccgcgagcgt
cttttgccgcccgcgcggcgcggtcactaccgcgagtacacggtggcaacgcccggctcg
cgcgatcgcggtgcacggcgcattgtctgcggcggagaacagcgcaccacacccgaggcc
tgctggtacacggcagaccactacgcgagtttcagacggattgcaccatga
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