Vibrio aquimaris: FIV01_13935
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Entry
FIV01_13935 CDS
T06969
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq00300
Lysine biosynthesis
vaq00470
D-Amino acid metabolism
vaq01100
Metabolic pathways
vaq01110
Biosynthesis of secondary metabolites
vaq01120
Microbial metabolism in diverse environments
vaq01230
Biosynthesis of amino acids
Module
vaq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIV01_13935 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FIV01_13935 (lysA)
Enzymes [BR:
vaq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FIV01_13935 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QFT27501
UniProt:
A0A5P9CNF7
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Position
complement(2972606..2973859)
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEDIPLTQLAEQYGTPLYVYSRATLERHWNAFDKSVGKHPHLVCYAV
KANSNLGVLNTLARIGSGFDIVSGGELERVIAAGGEPSKVVFSGVGKTSQEMEQALKLGI
KCFNVESEPELERLNQVAGKLGLKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP
AVYKFAQGLEHLDIQGIDCHIGSQLTDIEPFIDATDRLLALIDDLKTQGINIKHLDVGGG
LGVIYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVVPKDGQAVTYDLVGPICETGDFLGKDRSLVIEE
NDVLAVRSAGAYGFVMSSNYNTRARAAEVMVDGDRVHLVRQREELSSLWALENILAE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattactttaactatcaggatgatggccagctttgggccgaagatatacctctcact
cagttagcagagcagtacgggactcctttatacgtatactcacgcgcgacacttgagcgt
cattggaatgcgtttgataaatcggttgggaaacacccgcacctagtttgctacgctgtt
aaagcgaattcgaatttgggtgttctgaatactctagcacgtataggctctggctttgat
attgtatctggtggtgagttagagcgtgttattgccgctggtggtgaacctagcaaggtg
gtattttccggtgtgggtaaaacctcacaagagatggaacaagctttaaaacttggcatt
aaatgtttcaatgttgagtctgaaccagagcttgaaagattaaaccaagttgctggtaag
ttaggtttgaaagcacctatttcgctgcgtatcaatccagatgtggacgcaaatactcac
ccctatatttcaaccggactacgtgataacaagttcggtatagcttttgatagggcgcca
gcagtatataaatttgctcaaggccttgagcatttggatattcaagggattgattgtcat
atcggatcacagcttaccgacattgagcctttcattgatgcgaccgatcgtcttttagct
ctaatcgatgatcttaagactcagggtataaatattaagcaccttgatgttggtggcggc
ttaggagtgatttaccgggatgaattgccacctcagccttcagattacgctaaggctttg
ttgggaaggttagagaaccaccaggatctcgaactcatctttgaacctggtcgtgccata
gccgctaatgcaggggttttgttgactaaggttgaatttcttaaacacacagagcataag
aactttgccatcattgatgctgcgatgaacgatttaatgcgtcctgcgttatatcaagcg
tggcaagatattgtacctgtcgtgccaaaggatggacaagctgtcacttatgacttggtg
ggaccaatttgtgaaacaggcgattttctcggtaaagacagatcattggttatcgaagaa
aatgacgtattggccgtacgatctgctggggcatatggctttgtgatgtcttccaactat
aatactcgagctcgtgctgctgaagttatggttgatggtgatagggtacacttagtacgt
cagcgtgaagaattatcgagcttgtgggcactagagaatattcttgcggagtga
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