Vigna angularis (adzuki bean): 108325827
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Entry
108325827 CDS
T04660
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108325827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108325827
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
108325827
SWR1 complex
108325827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
108325827
NCBI-ProteinID:
XP_017414394
LinkDB
All DBs
Position
2:complement(2856574..2880223)
Genome browser
AA seq
2048 aa
AA seq
DB search
MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMIDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDAHKSGENNSAEHHMSIQRKDAHGDVINEP
KEADVVEYQSDAADNDDEYDVQSDDESEDDEQTIEQDEALITKEERQEELEALQNEMNLP
IEELLKRYAGEKGESMMKESSPEHSEDVEKIVGTTGDGKKILPSENGDDHLSVSKNGTNN
SSMVSGRRCDESDGDMATPTKNLSQYEEGQSENLKEVPSETANEDFSYDFTDEEEDGDFL
LGTEDKDDETTLSEEEKLERVDAIDPKDEIALLQKESDMPVEELLARYKRDPSDNEDGGY
ETDYASALSEDHSDSPVHEDAEQKDSAIPMDEDIKSGEHLATTQSQTEEHWESPHENLDQ
RESEHIIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRL
NGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT
YFGSAKERKFKRQGWLKPNSFHICITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQ
RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEG
EEKINKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSE
TQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDICGIDVQLSSSVCSMLLPSP
FSVVDLRGLGLLFTDLDYSMTAWESDEVGAIETPGTSIMERTDIDELEVIRPLNCQKRLQ
GTNIFEDIQRKIWEERLKQAKERATAIAWWNSLRCKKRPMYSTTLRNLVTLRHPVYDIHL
VKANPTSYMYSTKLADIVLSPIERFQKMTDVVESFMFAIPAARAPSPVCWCSKSETNVFL
QPSYKQKCSEVLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELANLLRKLKSEGHRA
LIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGG
VGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQ
KRALDNLVIQSGSYNTEFFKKLDPMELFSGHRTLSIKNMLKEKNQNNGEVSVTNADVEAA
LKCVEDEADYMALKKVELEEAVDNQEFTEEAIGRLEEDEYVNEDDETAELGESVSNLNKE
NALVLNGSDQKEDRPPNSVVVKEDDADVLADVKQMAAAAAAAGQAISAFENELRPIDRYA
IRFLELWDPIIDKTALESEVRIEDTEWELDRIEKYKEEMEAEIDEDEEPLVYESWDADFA
TMAYRQQVEALAQHQLMEELEYEARLKEAEEEACDSKKTTPGDLKPKPKKKPKKAKFKSL
KKGSLTSGLKPVKEESQAEPMNIDDEDITGLEFVSPNSSMQKKRKSKATTDGEEKRLKKS
KKSKRDPPDIYASDLESNALVVQYEHAESKTSESLVDLEQKTAGRGKMGGKISITPMPVK
RIWTIKPEKMRKGNHWSKDCIPSADFWLAQEDAILCAVVHEYGPNWSLVSDILNSMTAGG
SYRGRYRHPVHCCERFRELFQKNVLSMDNANNEKAITPGSGKALLKVTEDNIRMLLDVAS
EQANRELLLQKHFFALLSSAWKVASHVDRRQNPSPTCNGLYFDQGLFTSIGQPSQNSLKK
SSERVPFANLVQSKKLVAAALDDSTTGQVNDRVILPNQGEGLPVSADRLDITLEFPKEES
DVLALFPSVINLSIHGTDPTPSLSKQTGEDGFKIGLFMAENRFREATRICEEDVSGWASS
AFPTSDARSRPGSRIQSSGKQKSSISDSAKPSRSKSKRASIDVSEMHHHQADSIVQSVPS
LKDLRFDLTSFTTDEIGLTAVDTCFPFDLNVESSWEMEGVGMIPHDYVTGLISDLDDCTT
FPEYTDIR
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtcccaggtctaagattgatcatgagagcagagccaaacggcaaaag
gctcttgaagctccaagggagcctcgcagaccgaaaactcattgggaccatgtcttagaa
gaaatggtgtggttatcaaaggattttgaatcagagaggaaatggaaattagctcaggca
aagaaagtagctttaagagccagcaaaggcatgatagatcaggctacaaggggtgaaaag
aagatgaaggaagaagaacagcgattaagaaaggttgcactaaatatttctaaggatgtt
aagaaattctggacaaaaatagaaaagctggttctttacaaacatcaaatggaacttgat
gaaaagaagaaaaaggcacttgacaaacagcttgagtttttattagggcaaacagagagg
tactcaacaatgctggcggaaaatcttgtggatgctcataaatcaggagagaataattct
gcagagcatcacatgagtattcaacgcaaagatgcgcatggagatgttattaatgaacct
aaagaagctgatgttgtggagtatcaatcagatgctgccgacaatgatgatgaatatgat
gtacaatctgatgatgaatcggaggacgacgagcaaacaattgagcaagatgaggctttg
attactaaagaagagagacaagaggaattggaagctttgcaaaatgaaatgaatcttccg
attgaggagttactcaagcgttatgcaggggagaaaggagaatctatgatgaaagaaagt
agtccagagcatagtgaagatgttgagaaaatagtaggaacaactggtgatggtaagaaa
atattaccatcagaaaatggtgatgatcatttatctgttagcaaaaatggtacaaacaac
tccagtatggtctctggtcgacgttgtgatgaaagtgatggtgatatggctacaccaaca
aaaaatctatctcaatatgaggaaggtcaatctgaaaatctaaaagaggttcccagtgag
acagccaatgaagatttttcgtatgattttactgatgaagaggaagatggtgactttttg
cttggcacagaagacaaggatgatgaaacaaccttatcagaggaggaaaaactggaaaga
gttgatgcaatagatcccaaggatgagattgcattattacaaaaagagagtgacatgcct
gttgaggaactgcttgcaaggtataaaagggacccgagtgacaacgaagatgggggatat
gaaactgattatgcttctgctttatccgaagaccattcagactctcctgtccatgaagat
gctgagcaaaaggattctgccattcctatggatgaagatataaagtctggtgaacacctg
gctaccacacagtcccagacagaagaacattgggaatcacctcatgaaaatttggatcaa
agagaaagtgagcatataattgctgatgcagctgctgctgcaagatcagcacaacctact
ggaaacaccttctccacaactaatgtgcgtacaaagttcccttttcttctcaagtactct
cttcgtgagtatcaacatattggattggattggcttgtcaccatgtatgaaaaaagactg
aatggaattttggcagatgaaatgggtcttggaaaaacaattatgactatatctttgctt
gcacatcttgcttgtgaaaaggggatttggggtccgcatttaattgtggtaccaactagt
gtaatgcttaactgggagaccgaatttttgaaatggtgtcctgcctttaaaatattgact
tattttggaagtgccaaggagcgaaaatttaaaaggcaaggatggttgaaaccaaactca
tttcatatatgcataactacttatagattagttattcaggactccaaagttttcaagcgc
aaaaagtggaaatatctgatcttagatgaagctcatctcattaaaaactggaagtcacaa
aggtggcagacactcttgaatttcaattcaaaaaggcggattctcttgactgggacacca
ctacagaacgatctcatggaactgtggtctctcatgcatttcttaatgccccatgttttc
cagtcacatcaagagtttaaggattggtttagtaatcctatatcagggatggtagaggga
gaagaaaaaattaataaggaggttgttgaccgcctgcacaatgtccttcgtcccttttta
ctccgtcgactaaagagagatgtggaaaaacaacttccaatgaagcatgaacatgtcata
tattgtagactatcaaagaggcagcggaatttgtatgaggatttcattgctagctcagag
actcaagcaactcttgcaagtgccaatttttttgggatgattagtattatcatgcaactt
cgtaaagtttgcaatcatcctgatctatttgagggtcgtcctattgtcagttcgtttgat
atatgtggtattgatgttcagttaagttcttctgtttgctctatgcttttgcctagcccc
ttttcagtggtggacctaagaggtttgggtcttttatttactgatcttgactatagtatg
actgcatgggaaagtgatgaagttggagctattgagacccctggaacctcaatcatggag
cgtactgatatagatgagctagaagtaattaggccactaaattgtcaaaaaaggttgcaa
ggaacaaacatttttgaagacatccaaaggaaaatctgggaagagaggctaaaacaggca
aaggaacgtgcaacagctattgcatggtggaactccttgagatgtaaaaagagacctatg
tactcaacaactctgaggaatcttgttaccttaaggcatcctgtatatgacattcatctg
gtgaaagcaaatcctacttcatatatgtactcaacaaagctggctgacattgttctctcc
cccattgaacgatttcaaaagatgactgatgtggttgaaagcttcatgtttgcaattcca
gctgcacgggcaccctctcctgtttgctggtgcagtaaaagcgagacaaatgtgtttctg
cagccatcttacaagcagaaatgctctgaagttttgttgccgctactgtcaccaatccga
ccagcaattgttcgccgacaagtgtatttccctgataggcgtcttatacaatttgactgt
gggaaactgcaggaactggcaaatttgttgagaaaattaaaatcagaaggccaccgagct
ctgatattcacccagatgacaaagatgcttgacatattagaggcattcattaacttatat
ggctatacatacatgcgcttagatggatcaacccaaccagaggagagacagaccttaatg
caacgctttaacacaaaccccaaatattttcttttcatcttgtcaacccgtagtggtggt
gttggtatcaatctagttggagctgacacagttattttttatgatagtgactggaatcct
gctatggatcaacaggcacaagatcgatgccatagaattggtcagacacgtgaagttcat
atttatagattgataagtgaaagcaccattgaggagaatattttgaagaaagcaaatcag
aagcgtgcacttgataatctagttatacaaagtgggagttataatactgagttcttcaag
aagcttgatcctatggaactattttcaggccatagaacactttcaataaaaaatatgctg
aaggagaaaaaccagaacaatggggaagtttctgtaacgaatgcagatgtagaggctgca
ctgaaatgtgttgaagatgaggcagattacatggctttgaagaaagttgaactggaagag
gctgtggacaaccaggagtttaccgaagaagccattgggagacttgaagaggatgaatat
gtaaatgaagatgatgaaactgcagaattaggtgaatctgtttcaaacttaaataaagag
aatgccttggtgttaaatggaagtgatcagaaggaagatagaccaccaaactctgttgtt
gtcaaagaagatgatgctgatgtgctggctgatgtcaaacagatggctgcagctgcagct
gcagctggacaagctatctcagcatttgaaaatgagctacgccctattgatcgatatgcc
attcgctttctggaactgtgggatccaattatagataaaacagctttggaatctgaagtc
aggattgaggacacggaatgggagttggatcggattgaaaagtacaaggaggagatggag
gctgaaattgatgaagacgaggaacctcttgtatatgaaagctgggatgctgattttgca
acaatggcatatcgacagcaagtagaggccttggctcaacatcagttgatggaggaactt
gaatatgaagctagactgaaagaagctgaggaagaagcttgtgattctaaaaagacaaca
ccaggggatttgaagcccaaacctaaaaagaaacctaagaaggcaaagttcaaatctcta
aagaaaggatctttaacttctgggttgaaacctgtgaaagaagagtcacaagcagagcca
atgaacattgatgatgaggatatcactggtctggaatttgtgtctccaaattcatccatg
cagaaaaaacgtaaatctaaagcaacgactgatggtgaagaaaagagacttaagaagtcc
aaaaagtccaagagggatcctcctgacatttatgcgtctgatttagaatccaatgctttg
gttgtgcaatatgaacatgcagaatcaaagactagtgaaagtctggttgatttggaacag
aaaacagcaggcaggggtaagatgggaggaaaaatatccatcactcctatgcctgtaaaa
cggatctggacgataaagccagaaaaaatgagaaagggaaatcattggtccaaagattgt
attccatcagctgatttttggctggctcaggaggatgctatattatgcgctgttgttcat
gaatatggtcctaactggagtttggttagtgatattcttaatagcatgactgctggtggg
tcatacagggggagatatcgacatcctgtccattgctgtgagcggtttagagaactattc
cagaagaatgtattgtcaatggacaatgcaaataatgagaaggccatcactcctggctct
ggaaaggctcttcttaaagttacagaggataacatacggatgctgttagatgttgcttct
gagcaggcaaatagggagttgctgctgcagaagcacttttttgcattgctttcatctgcc
tggaaggtggcatcacatgtcgaccgcaggcaaaatccatcacccacctgtaatggtctc
tattttgatcagggtctttttacttccataggccagccttcccaaaattccttgaagaaa
tcctctgaaagggtgccatttgcaaatctggtccagagtaagaagttagtagcagctgca
cttgatgattccacaactgggcaagtgaatgatagagtcatcctccctaaccaaggggaa
ggcttgccagtgagtgctgataggttggatattactctggaattcccaaaagaggagagt
gatgtcttagctttatttccatccgttataaacttatcaatacatgggactgatccaaca
ccatctttaagtaagcaaacaggagaagatggctttaaaattggtctgtttatggcagag
aatcgtttcagggaggcaacaagaatttgtgaagaagacgtctctggatgggcatcatct
gcattcccaaccagcgatgcaaggtctcgacctggatccaggatacaatcctctggaaag
cagaagtcttccatatctgactctgctaagccttctaggtcaaagtctaaaagagcttca
attgatgtcagtgaaatgcatcaccatcaggctgactcaatagtccagtcggtgccatca
cttaaggatctgagatttgatctcacttcattcactacagatgaaattggacttactgct
gtggacacatgtttcccctttgacttgaatgtggaaagttcatgggaaatggagggtgtt
ggaatgatcccacatgattatgttactggtttaatctcagaccttgatgattgtacaaca
ttccctgaatatactgacattagataa
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integrated database retrieval system
