Vigna angularis (adzuki bean): 108329153
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Entry
108329153 CDS
T04660
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108329153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108329153
Spliceosome [BR:
var03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108329153
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6139
Motif
Other DBs
NCBI-GeneID:
108329153
NCBI-ProteinID:
XP_017418709
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Position
3:21866883..21878130
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEAEILENNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQK
TQRYIDIIQKVEEALKMGSDVSTQGLDLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP
LPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAK
STLVARVDSIQGDPSGNTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVAQSKLAA
KVAKRFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacccttgctgattcttttcttgccgacctcgatgaactctctgataatgaggcc
gaaattctagagaataacgatgttgatgctgctgacatggaagaggatgttgatggtgat
ctggctgacctagaaaacctcaactatgatgacttggacagtgtttccaagttgcagaaa
acacagaggtacattgatattatacagaaagtggaagaggcccttaaaatggggtcagat
gtctccactcagggactggatctagaagatgatcctgaatatcaattgattgtggattgc
aatgctctgtcagttgacattgagaatgaaattgttataatccacaattttattcgtgac
aaatatcgattgaaatttcctgagcttgagtcattggtgcatcacccaatcgattatgca
cgtgttgttaagaagataggaaatgaaatggatttgactcttgttgatttagaagggctt
ttaccctcagccatcataatggttgtgtctgttactgcttcaactacaactggcaagcct
cttccggaagaagtccttagtaagactgtcgaggcctgtgatcgagcacttgatcttgat
tcagcaaagaagaaagttctagatttcgttgagagtagaatgggctacattgcacccaat
ctctctgctattgttggaagtgctgttgcagctaaactcatgggcacagctggtggtctg
gcatctctagcaaagatgcctgcttgtaatgttcagcttcttggtgccaagaaaaagaat
cttgctgggttctccacagcaacatcacaatttcgtgtaggataccttgagcaaacagag
atatttcagactactcctccatctctaaggatgcgagcatgtcgactcttggcggcaaag
tctacacttgtagcacgcgtagattccatacagggtgatccatctggaaatactggaagg
gctttcaaggatgagattcacaaaaaaattgagaagtggcaggagccccctcctgcaaag
caaccaaaaccactaccagttcctgattctgagcctaaaaagaagagaggtggtcggcgg
cttaggaagatgaaggaaaggtatgcaataacagacatgaggaagttagccaataggatg
caatttggagtcccagaagagagttcattaggagatggtctgggtgagggctatggaatg
cttggtcaggctggcagtggcaaattgcgtgtgtctgttgctcaaagcaaacttgctgca
aaagttgcaaaaagattcaaggaaaagaattatggtagcagtggtgctacatctggtttg
acatcaagtcttgcattcacaccagtgcaggggattgagctgacaaatccacaggctcat
gcacatcaacttggtagcggaactcaaagcacctacttctctgaaacaggaacattttcg
aagattaagaggacatga
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