Vigna angularis (adzuki bean): 108340375
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Entry
108340375 CDS
T04660
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108340375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108340375
Membrane trafficking [BR:
var04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108340375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
Phage_TTP_12
CAC1F_C
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108340375
NCBI-ProteinID:
XP_017433201
UniProt:
A0A0L9V6R8
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Position
8:complement(24124454..24138280)
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AA seq
953 aa
AA seq
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MAPFPSENGVEGDDEREEEDEEEEEDEEEVEDEEDEEEPRLKYQRMGGSIPSLLASDAAS
CIAVAERMIALGTHGGTVHILDFLGNQVKEFSAHASVVNDLSFDTEGEYIGSCSDDGSVV
INSLFTDEKLKFDYHRPMKAVALDPDYAKKMSRRFVAGGLAGHLYLNSKKWLGYRDQVLH
SGEGSIHAVKWRASLVAWANDAGVKVYDTANDQRVTFIEKPRGSPRPELLLPHLVWQDDT
LLVIGWGTSVKIASIRTIRAANGSFRQVPLSGVAQVDIVASFQTSYFISGLAPFGDALVV
LAYIPGEDGDKDFSSSAPSRQGNAQRPEVRIVTWNNDELSTDALPVHGFEHYRAKDYSLA
HAPFSGSSYAGGQWAAGDEPLYYIVSLKDVVIAKPRDTEDHIAWLLQHGWHEKALAVVES
GQGRSELLDEVGSRYLDHLIVERKYSEAASLCPKLLRGSAPAWERWVFHFAHLRQLPVLV
PYMPTENPRLRDTAYEVALVALATNSSFHKDLLSTVKSWPSVIYSALPVISAIEPQLNTS
SMTDSLKEALAELYVINGQYEKAFLLYADLMKPEVFDFIDKHNLHDAIRGKIVQLMMLDC
KRAVPLLIQNRDLISPPEVVKQLLNADDKSDRRYFLHLYLHSLFEVNPHAGKEFHDMQVE
LYADYDPKMLLPFLRSSQHYTLEKAYDICIKRDLLREQVFILGRMGNSKQALAVIINHLG
DIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGILLEHTVGNLNPLYIVNKVPNGLEIPR
LRDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYNEARHGVSLGNEEDETRVKMSD
TRASQVFEKSPSLRTMEMKSKTRGGGRCCICFDPFSIQNVSVIVFFCCHGYHTTCLMDSS
YTSSNKKETTSLEAGMYDGYNGYEDDASDDVEDEETKSGGPRMRCILCTTASS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtttccgtctgagaacggcgtcgaaggagacgacgagagagaagaggaagat
gaagaggaagaagaagatgaagaagaagtggaagatgaagaagacgaagaggaaccgagg
ctcaagtaccagagaatgggaggtagcataccttcgctgctagcgagtgacgccgcgtca
tgtattgccgtcgccgagcggatgatcgctctcggcactcacggcggcaccgttcacatc
ctcgattttctcggtaatcaggttaaggaattctccgcacatgcttctgttgtcaacgac
cttagctttgacacagaaggtgaatatattggaagctgttctgatgatggatcagttgtg
ataaacagccttttcactgatgagaaattaaagtttgattaccatcggccgatgaaggca
gttgccttggatccagattatgcaaagaaaatgtccaggagatttgttgctggaggtttg
gctggtcatttatatttgaattcaaagaaatggctgggctaccgtgatcaggttttgcac
tctggtgaaggttcaatacatgctgtgaaatggagagcaagtcttgttgcttgggctaat
gatgcaggagtgaaggtttatgatactgccaatgaccagcgtgttacatttattgaaaaa
ccgcgagggagcccacgccctgagcttttacttcctcacctggtctggcaggatgatacc
cttttggtaattggatggggaacatctgtcaaaattgcttcaataaggacaataagggca
gcgaatgggtcgttcaggcaggttcctctgtctggtgtggcccaggtggatattgtggca
tctttccaaaccagctatttcatctcagggcttgctccctttggtgatgctttggttgtt
cttgcatatatccctggagaagatggagataaggattttagtagctcagctccttcacgg
cagggcaatgctcaaagaccagaagtaagaatagtaacatggaataatgatgagctttca
acagatgctctgccagtacatgggttcgagcattacagagcgaaagactactctcttgct
catgctcccttctcaggtagcagttatgctggcggtcagtgggctgcaggtgatgaacca
ctttactatattgtatctctgaaggatgtagttattgccaagccaagggatactgaagat
catattgcgtggcttcttcagcatgggtggcatgaaaaagcattggctgtggttgaatct
ggtcagggacgaagtgaactacttgatgaggtgggatctaggtaccttgatcatctgatt
gtggaaagaaaatacagtgaagcagcatctctgtgtcccaagttgcttcggggatcagct
ccagcttgggagagatgggttttccattttgcacatcttcgtcaactacctgttttagtt
ccttacatgcctacagaaaaccccagactacgtgacactgcttatgaggttgctcttgtt
gcattggctacaaattcttcttttcataaggatctcttgtccactgtaaaatcctggcct
tctgtaatttattctgcattacctgtaatttcagccattgaacctcagctaaatacttcg
tccatgactgattcacttaaggaggcactggcagagttgtatgtaatcaatgggcaatat
gagaaggccttcttgttgtatgctgatcttatgaaaccagaagtatttgattttattgat
aaacataacctacatgatgcaattcgtggaaagattgttcaattaatgatgctagattgc
aagcgtgcagttcctttgttgatccaaaatagagacttaataagtccacccgaagttgtg
aagcaacttctaaatgctgatgataagagtgatcgtagatattttttacatctatatctt
cattcattatttgaagtaaatcctcatgctgggaaagaattccatgatatgcaggtagaa
ctctacgcagactatgatccaaagatgctactaccttttctccgtagcagtcaacactac
acccttgagaaggcttatgacatttgcattaaaagggacctattgagggagcaagtcttc
attctaggaaggatgggaaactcaaaacaagccctagctgttattataaaccatttgggg
gatatagaggaggctgtagagtttgtcaccatgcagcatgatgatgaactttgggaagaa
ttgatcaaacaatgccttcacaaacctgaaatggtgggcatattgttggagcacacggtt
ggaaatctgaatcccctttacattgtaaataaggttcctaatgggttggaaatacctcgg
ctccgggatcgactggttaagattatcactgactacaggactgaaacatcactcaggcat
gggtgcaatgatatccttaaggcggactgtgtcaatcttttaatcaagtattacaacgag
gcaaggcatggagtttctttaggtaatgaagaagatgagacacgagttaaaatgagtgac
actcgtgcttctcaggtatttgagaaatccccgagtctgagaactatggagatgaagtca
aagactaggggaggtggaagatgttgtatatgttttgatccattttctatacagaatgta
tcggtcattgttttcttttgctgtcatggttatcatacaacttgtctcatggattcctct
tacactagtagtaacaagaaagaaaccacgtccctagaggcaggaatgtatgatggttac
aatggttatgaggacgatgctagcgatgacgttgaagatgaagaaaccaagtcgggtggc
ccacgaatgcgctgtatattgtgtactactgcttctagttga
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