Variovorax boronicumulans: CKY39_01620
Help
Entry
CKY39_01620 CDS
T05068
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKY39_01620 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbo03400
]
CKY39_01620 (xth)
Enzymes [BR:
vbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CKY39_01620 (xth)
DNA repair and recombination proteins [BR:
vbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CKY39_01620 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ATA52066
UniProt:
A0A250DCK5
LinkDB
All DBs
Position
complement(351683..352486)
Genome browser
AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDVEGRFEQMAGLQGHFHF
AEKKGYAGTAIYTKHAPSAVVVGWGDPEFDAEGRYLELRFDTPKRKFSVISCYFPSGSSG
EERQAAKFRFLKGFFPHLLALKKEREFILCGDINIAHQEIDLKNWRGNQKNSGFLPEERA
WMTRLLDAGTEGAGLVDVYRRLKPDTTGDAYTWWSNRGQAYANNVGWRLDYHLATPAMGA
LARTEAIYKTVKFSDHAPITVEYDFTL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaaactgaccagtctcaatctcaatggcctgcgctcggcggccaccaagggcgtc
gccgactgggtggccgaactcgcgccggattgtatttgcatgcaggagatccgcgtccag
gccagcgatgtcgagggccgcttcgagcagatggccggcctgcagggccacttccacttt
gccgagaaaaaaggctacgcgggcaccgccatctacacgaagcatgcgcccagcgccgtg
gtggtgggctggggtgatcccgaattcgacgccgaaggccgctacctcgagctgcgcttc
gacacgcccaagcgcaagttctcggtgatcagctgctacttcccgagcggcagctcgggc
gaggagcgccaggccgccaagttccgcttcctgaagggcttcttcccgcacctgctggcg
ctgaagaaggagcgcgagttcatcctgtgcggcgacatcaacattgcgcaccaggaaatc
gacctgaagaactggcgcggcaaccagaagaacagcggcttcctgcccgaagagcgcgcc
tggatgacgcgcctgctcgacgccggcaccgaaggcgcgggcctggtggacgtgtaccgc
cgcctcaagcccgacaccaccggcgacgcctacacctggtggagcaaccgcggccaggcc
tacgcgaacaacgtgggatggcggctggactaccacctggccacgccggcgatgggcgcg
ctggcgcgcaccgaggcgatctacaagacggtcaagttcagcgaccacgcgccgatcacg
gtggagtacgacttcacgctgtaa
DBGET
integrated database retrieval system