KEGG   Variovorax boronicumulans: CKY39_05105
Entry
CKY39_05105       CDS       T05068                                 
Symbol
putA
Name
(GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
vbo  Variovorax boronicumulans
Pathway
vbo00250  Alanine, aspartate and glutamate metabolism
vbo00330  Arginine and proline metabolism
vbo01100  Metabolic pathways
vbo01110  Biosynthesis of secondary metabolites
Module
vbo_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    CKY39_05105 (putA)
   00330 Arginine and proline metabolism
    CKY39_05105 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vbo03000]
    CKY39_05105 (putA)
Enzymes [BR:vbo01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     CKY39_05105 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     CKY39_05105 (putA)
Transcription factors [BR:vbo03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    CKY39_05105 (putA)
SSDB
Motif
Pfam: Pro_dh Aldedh Pro_dh-DNA_bdg PRODH OmdA
Other DBs
NCBI-ProteinID: ATA52658
UniProt: A0A250DE62
LinkDB
Position
complement(1127987..1131727)
AA seq 1246 aa
MSANDPAPLPSTFVTFADGPAAPSALRARITAACRPPESEALAPLLAQARLPADQAAEAH
ALAHRIAHQLRQRKNGGGRSGLVQGLLQEYALSSQEGVALMCLAEALLRIPDADTRDALI
RDKIAQGQWQAHAGHSPSVFVNAATWGLLLTGRLVATHSETGLSATLTRLIGKGGEPLIR
KGVDMAMRMMGEQFVTGETIAQALAHARTLEAQGFRYSYDMLGEAALTADDARRYRAAYE
DAIHAIGRASNGRGVYGGPGISIKLSALHPRYSRAQYTRVMAELYPVLRDLALLALHYDI
GLNIDAEEADRLELSLDLLERLCFEPALAGWQGIGFVVQGYQKRCPFVIDWVIDLARRSG
HRLMVRLVKGAYWDSEIKRAQLDGLAGYPVYTRKAYTDVSYLACARRLLDAPDAVYPQFA
THNAHTLAAIYTMADPSRYTPGQYEFQCLHGMGEPLYEQVVGPLGRPCRIYAPVGTHETL
LAYLVRRLLENGANTSFVNRIADASIPLDTLVEDPVATVERMAAQEGAIGLPHAAIPLPA
ALYGAQRANSQGLDLASETTLHALAATLQASASEPWRATPMLAAPRAEDEASRTWAEVRN
PADRRDLVGQVQDAVPGDVASALAQAEAVAAAWAATPPAERAAALERGATRLEAQQPRLL
GLLMREAGKSGANAIAEVREAVDFLRYYAAQARTDFANATHRPLGPVVCISPWNFPLAIF
TGQVAAALAAGNPVLAKPAEQTPLVAAEAVHVLWEAGVPRAAVQLLPGRGETVGAALVGD
ARVQGVMFTGSTEVARLLQKTLSARLGAQGAPVPLIAETGGQNAMIVDSSALVEQVVADV
MASAFDSAGQRCSALRVLCVQEEAADRLVAMLQGAMAESCIGNPARLAVDVGPVIDDEAR
DGIERHIAGMRGRGRRVFRQGREFGHDTRHGTFVLPTLVELEHLGELQREVFGPVLHLLR
YRRRDLGALIGQINGSGYGLTLGVHTRIDETIAQVVAQAQAGNVYVNRNMVGAVVGVQPF
GGEGLSGTGPKAGGPLYMARLLSARPDDVLARAVADDAPVSPSAGLAALEGWARDTGHDA
LAAQCRRFAGLAHVGRARTLAGPTGERNVYTLQPREAVLCLADAEADRLVQLAAVLSVGS
TAIWPADAPGAHALLAALPDEARHAVVLANDWRAPTVVFDAVLHHGDAGHLASVLQQVAA
RPGPIVGVRGFAPGDTGIPLESLVLERALSVNTAAAGGNASLMTIG
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgagcgccaacgatcccgcccccctgccctcgaccttcgtcaccttcgccgacggcccc
gccgcgccgtccgcgctgcgcgcccgcatcacggctgcctgccggccgcccgaatcggag
gcgctggcaccgctgctcgcgcaggcccggctgccggccgatcaggccgccgaagcccac
gccttggcccaccgcatcgcccaccagctgcgccagcgcaagaatggcggcggccgctcg
ggcctcgtgcagggcctgctgcaggagtacgcactgtcgtcgcaggaaggcgtggcgctg
atgtgcctggccgaagcgctgctgcgcattcccgacgccgacacgcgcgacgcgctcatc
cgcgacaagatcgcgcagggccagtggcaggcgcacgcggggcacagcccctcggtgttc
gtcaacgccgccacctggggcctgctgctcacgggcaggctggtggccacgcacagcgag
acgggcctgtcggccacgctcacgcggctgatcggcaagggcggcgagccgctgatccgc
aagggcgtggacatggcgatgcgcatgatgggcgagcagttcgtcaccggcgaaaccatc
gcccaggcgctggcgcatgcgcgcacgctggaggcgcagggctttcgctattcgtacgac
atgctcggcgaggccgcgctcacggccgacgacgcgcgccgctaccgcgcggcctacgaa
gacgccatccacgccatcggccgcgcctcgaacgggcgcggcgtgtacggcgggccgggc
atctcgatcaagctgtcggcactgcacccgcgctacagccgcgcgcagtacacgcgcgtg
atggccgagctgtacccggtgctgcgcgacctggcgctgctggcgctgcactacgacatc
ggcctgaacatcgacgccgaagaagccgaccggctcgaactctcgctcgacctgctggag
cgcctgtgcttcgagcccgcgctggcgggctggcagggcatcggcttcgtggtgcagggc
taccagaagcgctgccccttcgtgatcgactgggtgatcgacctcgcgcgccgcagcggc
caccggctcatggtgcgcctcgtgaagggcgcctactgggacagcgagatcaagcgcgcg
cagctcgacggtctcgcgggctacccggtctacacgcgcaaggcctacaccgacgtgtcg
tacctcgcgtgcgcgcgccgcctgctcgatgcgcccgacgcggtgtacccgcagttcgcc
acgcacaacgcccacacgctggccgcgatctacacgatggccgacccgtcgcgctacacg
ccgggccagtacgaatttcaatgcctgcatggcatgggcgagccgttgtacgagcaggtg
gtgggcccgctcgggcggccctgccgcatctacgcgccggtgggcacgcacgagacgctg
ctggcctacctggtgcggcggctgctggagaacggcgccaacacctcgttcgtgaaccgc
atcgccgatgcgtcgattccgctcgacacgctggtggaagacccggtcgcgaccgtcgag
cgcatggcagcgcaggaaggcgcgataggcctgccgcacgcggccattccgttgccggcc
gcgctttacggcgcgcagcgcgcgaactcgcagggcctggacctcgcgagcgaaaccacg
ttgcatgcgctcgcggccacgctgcaggccagcgcgagcgaaccgtggcgcgcgacgccg
atgctcgccgcgccacgcgccgaagacgaagccagtcgcacctgggccgaggtgcgcaac
cccgccgaccgccgcgacctcgtcggccaggtgcaggacgcggtgccgggcgacgtggcc
tcggcccttgcgcaggccgaagccgtcgccgccgcatgggccgccacgccgcccgccgaa
cgcgccgccgcgctcgagcgcggcgccacccggctcgaagcgcagcagccgcgcctgctc
ggcctcttgatgcgcgaggccggcaagagcggcgccaacgccatcgccgaggtgcgcgag
gcggtcgacttcctgcgctactacgcggcgcaggcgcgcaccgacttcgccaacgccacg
caccgcccgctcgggccggtggtgtgcatcagcccgtggaactttccgctcgcgatcttc
accggccaggtggccgcggcgctcgcggccggcaacccggtgctggccaagccggccgag
cagacgccgctggtcgccgccgaagccgtgcacgtgctgtgggaagccggcgtgccgcgc
gcggcggtgcagctgctgccggggcgcggcgagaccgtcggcgccgcgctggtcggcgac
gcgcgcgtgcagggcgtgatgttcacgggctcgaccgaggtcgcgcgcctgctgcagaag
acgctgtcggcgcgcctcggtgcgcagggcgcgccggtaccgctgatcgccgagaccggc
gggcagaacgcgatgatcgtcgactcgtccgcgctcgtggagcaggtggtggccgacgtg
atggcctcggccttcgacagcgccggccagcgttgctcggcgctgcgcgtgctgtgcgtg
caggaagaagcggccgaccgcctcgtggcgatgctgcagggcgcgatggccgagagctgc
atcggcaaccccgcgcggctcgcggtggacgtgggcccggtcatcgacgacgaggcgcgc
gacggcatcgagcgccacatcgccggcatgcgcgggcgcggccggcgcgtgttccgccag
ggccgcgagttcggccacgacacgcgccacggcaccttcgtgctgcccacactggtcgag
ctggaacacctgggcgagctgcagcgcgaggtattcggccccgtgctgcacctgctgcgc
taccgccgccgcgacctgggcgcgctcatcggccagatcaacggcagcggctacggcctc
acgctgggcgtgcacacgcgcatcgacgagaccatcgcgcaggtggtggcgcaggcgcag
gccggcaacgtctacgtgaaccgcaacatggtcggcgccgtggtgggcgtgcagcccttc
ggcggcgaagggctgtcgggcaccgggccgaaggccggcgggccgctgtacatggcgcgc
ctgctgtcggcgcggcccgacgacgtgctcgcgcgcgccgtggcggacgacgcacccgtc
tccccgtcggccggcctcgcggcgctcgaaggctgggcgcgcgacacgggccacgacgcg
ctggccgcgcaatgccgccgcttcgcgggcttggcccacgtcggccgcgcacgcacgctg
gccggcccgaccggcgagcgcaacgtctacacgctgcagccgcgcgaagccgtgctgtgc
ctcgccgatgcggaagccgaccggctcgtgcagctggcggccgtgctgtcggtcggcagc
accgccatctggccggccgatgcgcccggcgcgcacgcgctgctggccgcgctgcccgac
gaagcacgccacgcggtcgtgctcgccaacgactggcgcgcgcccaccgtggtcttcgac
gccgtgctgcaccacggcgacgccggccaccttgccagcgtgctgcagcaggtggcggcg
cggcccggccccatcgtcggcgtgcgcggcttcgcgccgggcgacaccggcattccactc
gaaagcctggtgctggagcgcgcgctgagtgtcaacacggccgcggccggcggcaatgcg
agcctgatgacgatcggctga

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