KEGG   Variovorax boronicumulans: CKY39_05395
Entry
CKY39_05395       CDS       T05068                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vbo  Variovorax boronicumulans
Pathway
vbo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKY39_05395 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vbo02044]
    CKY39_05395 (gspD)
Secretion system [BR:vbo02044]
 Type II secretion system
  General secretion pathway protein
   CKY39_05395 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ATA52709
UniProt: A0A250DFF7
LinkDB
Position
complement(1202542..1204875)
AA seq 777 aa
MKKPLSSSGARPGLVALAVRLLIAASFVPVLPPAYAQTGDAPRRGEPITLNFAAADIEAV
ARTMAVVTGRDVVVDPRVKGTMNLVTDRPLAPAAAFNQFAAALRLQGFAVVEADGLYKVV
PEADAKLQTSTVNTSIGGASAAAGNQIVTQIFRLNYESANSLLPVLRPLIPPNNTINVNP
GNNSLVITDYADNMRRLARIIASLDVPNASDIEVIQLKHSVATDMVPLVTRLVEGGGAGA
PGAAAPGGADASFRTTLMADPRSNSLILRAANPARAQLVRTLVEKLDRAPAESSNGAAGN
IYVVYLKNADAVRLAATLRAAMAASQQQSQVPGAPGAAGSAGSSVPPASMPMTQASFGGN
NTQGGGSAAANAPLNNANQPSTGGQIQADPSTNSLIITAPEPQYRQMRAVIDKLDGRRAQ
VMIEALIVEVSAKKAANFGVQWQSALGNNAVIGTNSSLASANILALTQALATRDVANVRP
STGLNLGIAGKIGGQYILGAIANFFNSDGDANVLSTPNLLTLDNEEAKIVIGQNVPFVTG
QYASTSGSVGINPFTTVERKDVGLTLRVRPTINENGTVKMTIFQETSTVDQNTAKDPNGP
TTNKRSIESSVLVEDGGLVMLGGLLSDNYGNTVEKVPVAGDIPVLGNLFKNEVRTRDKSN
LMMFLRPAVMRDGASTEAFAYDRYDEIRGMQQRTQPNTDNIMLRGVDSAPVLPEAPLVRI
NRLNSNDSGKKSSETRMEGTQLIPPPRPATDNRRLAPSPLRGALPPTSDPTSSRESP
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgaagaagcctctgtcctcgtccggcgcccgccccggcctcgtcgcgctcgcggtacgc
ctgctgatcgcggcgtcgttcgtgccggtgctgccgcccgcctacgcgcagaccggcgac
gccccgcggcgcggcgaaccgatcacgctgaactttgccgccgccgacatcgaggccgtg
gcccgcaccatggcggtcgtgaccgggcgcgacgtggtggtcgacccgcgcgtcaagggc
accatgaacctggtcaccgaccgcccgctggcgccggccgccgccttcaaccagtttgcc
gccgcgctgcgcctgcagggcttcgcggtggtggaagccgacggcctgtacaaggtggtg
cccgaggccgacgccaagctgcagaccagcaccgtcaacacctccatcggcggcgccagc
gcggccgcgggcaaccagatcgtcacgcagatcttccgcctgaactacgagtcggccaac
agcctgctgccggtgctgcgcccgctgatcccgccgaacaacaccatcaacgtgaacccg
ggcaacaactcgctcgtgatcaccgactacgccgacaacatgcgccggctggcgcgcatc
atcgcgtcgctcgacgtgcccaacgcgtccgacatcgaggtgatccagctcaagcattcg
gtcgccaccgacatggtgccgctggtcacgcggctggtcgaaggcggcggcgcgggtgcg
ccgggcgccgccgcaccgggcggggccgatgcctcgttccgcaccacgctgatggccgac
ccgcgcagcaactcgctgattcttcgcgccgccaaccccgcgcgcgcgcagctcgtgcgc
acgctggtcgagaagctcgaccgtgcgccggccgaaagcagcaacggcgcagccggcaac
atctacgtggtctacctgaagaacgccgatgcggtgcgcctggccgccacactgcgcgcc
gccatggccgcgagccagcagcagtcgcaggtgccgggcgcgcccggcgccgcgggcagc
gccggttcgtcggtgccgccggccagcatgccgatgacacaggccagcttcggcggcaac
aacacccagggcggcggttcggccgccgccaacgcgccgctgaacaacgccaaccagccg
tccaccggcggccagatccaggccgacccgagcaccaactcgctgatcatcaccgcgccc
gagccgcagtaccgccagatgcgcgccgtgatcgacaagctcgacggccgccgcgcgcag
gtgatgatcgaagcgctcatcgtcgaggtcagcgccaagaaggccgccaacttcggcgtg
cagtggcaaagcgcgctgggcaacaacgccgtcatcggtaccaactccagcctggccagc
gccaacatcctggcgctgacgcaggccctggccacgcgcgacgtcgccaacgtgcggccc
tccaccggcctgaacctgggcatcgccggcaagatcggcggccagtacatcctgggcgcc
atcgccaacttcttcaacagcgacggcgatgccaacgtgctgtccacgcccaacctgctg
acgctggacaacgaagaagccaagatcgtcatcggccagaacgtgcccttcgtgaccggc
cagtacgccagcacctcgggctcggtcggcatcaacccgttcaccacggtggagcgcaag
gacgtgggcctcacgctgcgcgtgcgcccgaccatcaacgagaacggcaccgtgaagatg
accatcttccaggagacctccacggtcgaccagaacacggccaaggaccccaacggcccg
accaccaacaagcgctccatcgagtcgagcgtgctggtggaagacggcggcctcgtgatg
ctcggcggcctgctgtcggacaactacggcaacaccgtcgagaaggtgcccgtggccggc
gacatcccggtgctcggcaacctgttcaagaacgaggtgcgcacgcgcgacaagagcaac
ctcatgatgttcctgcgccccgccgtgatgcgcgacggcgcctccaccgaagccttcgcc
tacgaccgctacgacgagatccgcggcatgcagcagcgcacgcagcccaacaccgacaac
atcatgttgcgcggtgtcgactcggcgcccgtgctgcccgaggcgccgctggtgcgcatc
aaccgcctgaacagcaacgacagcggcaagaagagcagcgagacccgcatggaaggcacg
cagctcatcccgccgccgcgccccgccaccgacaaccgccggctcgcgcccagcccgctg
cgcggcgcactgccgcccacctccgacccgaccagctcgcgcgagtcgccctga

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