Variovorax boronicumulans: CKY39_20085
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Entry
CKY39_20085 CDS
T05068
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_20085
Enzymes [BR:
vbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CKY39_20085
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKY39_20085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ATA55256
UniProt:
A0A250DLL3
LinkDB
All DBs
Position
complement(4315058..4316908)
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AA seq
616 aa
AA seq
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MSSSDTDDAAMLPVEPEVKKRKRAATPKKVTEVAVESVAAPAEPAGAEAGEAPKKPRAPR
KKKVVEAPAADEQLVSAAEVAPAAEAPATVQPDVAPVAAEVVAAEADEPAPVEAQRPQMS
DEDQDDDRGDDEDDEEDEPDEEEDDLDRARRAAEREQRNAPPTEPIRFADVISGQFDADE
ESPEVPPLKRVLLPEADSPKLHKVLAQAGLGSRLEMEQLILQGRISVNNEPAHIGQRIQY
GDQVKINGKPIRYRIAPPPPRVIAYHKPVGEVVTHDDPQNRPTVFRKLPRLQQGKWQSVG
RLDLNTEGLLLFSSSGDLANQLMHPRFGLEREYAVRVLGALTSEEKKKLLEGVRLDDGMA
QFGTIEDGGGEGSNCWYRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPRGLKRG
AWMELDERDIQALFQASGGAQARPAGPSQRGPGGPEGGGRNGRNKKRRGNNNNNRNGGMG
GGQPREARGEAPIPSPLGDGRPPRGERGGRGGPNRGGGNGGPPLQGRRGNAGPGNRQGGQ
GQGQGGGGNRSAGAGGGGGANQPDPMKTSLGYIGADSFSRQRKEQRGGPGRRGGGGGSQG
GGGGFSGGGGGRRRGR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatccgacaccgacgacgcagcgatgctgccggtcgaacccgaagtcaagaag
cggaagcgggccgccacacccaagaaggtgacggaagttgctgttgaatccgtcgctgcg
cccgcagagccggcaggggccgaggccggggaagcgccgaagaagccgcgtgcaccccgc
aagaagaaggtggtcgaggcgccggctgccgatgagcaattggtgagcgcggcggaagtc
gctcctgctgcggaagctcccgcgacggtccagcccgatgtggcgcccgtggctgcggaa
gtggtggcagccgaggcagacgagccggcgccggtcgaagcacagcgtccccagatgtcc
gacgaagaccaggacgacgaccgtggggacgacgaagacgacgaggaagacgagcccgac
gaagaggaagacgacctcgaccgcgcccgtcgcgccgccgagcgcgagcagcgcaatgcg
ccgccgaccgagccgatccgttttgccgacgtcatttccggccagttcgacgccgacgag
gaaagccccgaggtgccgccgctcaagcgcgtgctgctgcccgaggccgattcgcccaag
ctgcacaaggtgctggcgcaggccggtctcggttcgcgcctcgagatggagcaactcatc
ttgcagggccgcatctcggtcaacaacgagccggcccacatcggtcagcgcatccagtac
ggcgaccaggtcaagatcaacggcaagccgatccgctaccgcatcgcaccgccgccgccg
cgcgtgatcgcgtaccacaagcccgtgggcgaggtggtcacgcacgacgatccgcagaac
cgcccgacggtgttccgcaagctgccgcgtctgcagcagggcaagtggcagtcggtcggc
cggctcgacctgaacaccgaaggcctgctgctgttcagcagctccggcgatctggccaac
cagctcatgcacccgcgcttcggcctggagcgcgagtacgcggtacgcgtgctgggcgcg
ctcaccagcgaagaaaagaagaagctgctcgagggcgtgcgcctggacgacggcatggcg
cagttcggcaccatcgaagacggtggcggcgaaggctccaactgctggtaccgcgtgacc
atttccgaaggccgcaatcgcgaggtgcgccgcctgttcgagtcggtgggccatgcggtc
agccggctgatccgcatccgctacggcgcgatggtgctgccgcgcggtctcaagcgcggt
gcctggatggagctcgacgagcgcgatatccaggcgctgttccaggcctcgggtggtgcg
caggcgcgaccggcgggtccgtcgcagcgcggtccgggcgggccggagggtggcggtcgc
aacggccgcaacaagaagcgtcgcggcaacaacaacaacaaccgcaacggcggcatgggt
ggtggtcagccgcgtgaagcgcgcggcgaagcgccgatcccgagtccgctgggtgacggt
cgtccgccgcgcggtgagcgtggagggcgcggtggtcccaatcggggcggtggcaacggt
ggcccgccactgcaggggcgccgcggcaacgcaggtcccggcaaccgtcagggcggccag
gggcaagggcagggcggcggtggcaaccggtcggcgggtgctggcggtggcggcggtgcg
aaccagcccgatccgatgaagacctcgctcggctacatcggtgccgacagcttctcgcgc
cagcgcaaggaacagcgcgggggcccgggacgccgcggcggtggtggcggctcgcaaggc
ggcggtggtggctttagcggtggtggcggcggacgccgccgcggacgctga
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