Variovorax boronicumulans: CKY39_25880
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Entry
CKY39_25880 CDS
T05068
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_25880
Enzymes [BR:
vbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CKY39_25880
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKY39_25880
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ATA56280
UniProt:
A0A250DPL8
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All DBs
Position
complement(5603420..5604520)
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AA seq
366 aa
AA seq
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MKNIIGAKKSPAGAPNPADRPAGADTGTPHAAIHFLTVDAESAGQRLDNFLFRHLKGVPK
THVYRIIRSGEVRINKGRAQAETRIEDGDLVRIPPVRISPRAEEGATPPAPAREFPVLLE
DEAVLAIDKPAGVAVHGGSGVSFGVIEQLRTARPGAKFLELVHRLDRETSGILLVAKKRS
ALVALQDQFRERETGKTYLALVEGDWPANKKVLDAPLAKYLLPDGSGAGAGERRVRVVAK
DHPDAMRAVTLVRVLARLSLPGDATPLSLLAVTIKTGRTHQIRVHLASAGHPIAGDDKYG
ESDRQRALHKLGLKRMFLHAWRLQFNHPASGERIALQAGLPPELHALMSRAALEAMAQHP
TPTAHD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacattataggtgcgaagaaaagccccgcgggggctccaaatcccgcggatcga
cccgcgggcgccgacaccggcacgccgcacgccgccatccacttcctgaccgtcgacgcc
gaatccgccgggcaacggctcgacaacttcctgtttcgccatctgaaaggcgtgccgaag
acgcacgtctaccggatcatccggtcgggcgaggtgcgcatcaacaaggggcgcgcccag
gccgagacccgcatcgaagacggcgacctggttcggattccgccggtccgcatctcgcca
cgcgccgaagagggcgccacgccacccgcaccggcgcgcgagtttccggtgctgctcgaa
gacgaggctgtgctggccatcgacaagccggccggtgtggcggtgcacggcggcagcggc
gtgagcttcggcgtgatcgagcagttgcgcacggcgcgcccgggcgccaagttcctggaa
ctggtgcaccggctcgaccgcgaaacctccggcatcctgctggtcgccaagaagcgcagc
gcactggtggcattgcaggaccagtttcgcgagcgcgaaaccggcaagacctacctggcg
ctggtcgaaggcgactggcccgccaacaagaaggtgctcgatgcgccgctcgccaaatac
ctgctgcccgacggttcgggcgccggtgccggcgagcgccgcgtgcgcgtggtcgccaag
gaccaccccgacgccatgcgcgccgtcacgctggtgcgcgtgctggcccgcctcagcctg
ccgggcgacgccacgccgctgtcattgctggcggtgaccatcaagaccgggcgcacccac
cagatccgcgtgcacctggcctcggccgggcatccgattgccggcgacgacaaatatggc
gagtccgatcggcaacgtgccttgcacaaactcggcctcaagcgcatgttcctgcatgcg
tggcggctgcaattcaaccacccggccagcggcgagcgcattgcgctgcaggccgggctg
ccgcctgagctgcatgcgctgatgtcgcgcgcggcgctcgaggcgatggcgcaacacccc
acccccacggcccatgactga
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